| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2219 |
|---|
| Symbol | |
|---|
| ID | 8535383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2388124 |
|---|
| End bp | 2389149 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646384599 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_003264081 |
|---|
| Protein GI | 261856798 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.127604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATA CCCATTTCAG ATCCATTCCT CTAATCGATA TATCCGGGTT ATATGACGAT
AGCCTGGTCG AACGCCAACG CGTTGCCGAT GAGCTGGGCC GAGCGGCACA CGATGTCGGC
TTCCTGCAGA TTACCGGGCA CGGCATTTCC CGCTCGTTAC GCGATGGATT GATCCGACAG
GCGCGCAGAT TTTTCGAGCG CCCGCTGCAC GAGAAGATGC GCTTCTACAT CGGCCAGTCG
AGTAACCACA GTGGTTATGT GCCGGAAGGC GAGGAACAGT TCGCGGGCGG CGGCAAGGAT
CTCAAGGAAG CTTATGATGT CAATTACAAC TACACAGAGG CAGCACAGAT CTATCCGCTG
CTGGGCCCGA CTCAATGGCC TGATTCGGCG GATTTCAGGC TAGAGGTGGG TGCCTATTAC
CGCGCGGCGC TGGCGCTGGG CGACACGCTG TTTCGTGGTT TTGCCCTGGC GCTGGGATTG
GCGGAGGAGA CCTTCGCCAA GATCACCCGT CACCCCACCA GCCAGTTGCG ACTGATCCAC
TACCCGCTCG ACCCTGATCC GGTGGCGGAC CGTCCCGGTA TTGGCGCGCA CACCGACTAT
GAGTGCTTCA CCATTCTTTT ACCCACAGCT GAGGGGCTTC AGGTACTCAA TGGGAATGGT
CAATGGATCG ATGTGCCACT GGTGGAAGAT GCCTTCGTGA TCAACATCGG CGACATGCTC
GAAGTGCTCA GCAACGGCCA TTTCGTGGCT ACCTCGCATC GCGTACGCAA GGTCAGCGAG
GAGCGCTTCG CCTTCCCACT ATTCTGCGCC TGTGACTACA CGACTCGTAT TGCTCCGATA
GCCGGACTTC CCCCGCGCGG TGAGCGCCGA TACGAGCCGA TCAACTGTGG CGACCACCTG
TTCGCCCAGA CCGCGCAGAC CTTCCGTTAT CTGCGCGAGC GGTTGGAGGA TGGTTCGCTG
CAACTGCCCG ATGGCGCGGC AGGCTTGTCC AGTTTCGGTC ATGGATACCG TGCGGAGAAG
GCATGA
|
|---|
| Protein sequence | MAHTHFRSIP LIDISGLYDD SLVERQRVAD ELGRAAHDVG FLQITGHGIS RSLRDGLIRQ
ARRFFERPLH EKMRFYIGQS SNHSGYVPEG EEQFAGGGKD LKEAYDVNYN YTEAAQIYPL
LGPTQWPDSA DFRLEVGAYY RAALALGDTL FRGFALALGL AEETFAKITR HPTSQLRLIH
YPLDPDPVAD RPGIGAHTDY ECFTILLPTA EGLQVLNGNG QWIDVPLVED AFVINIGDML
EVLSNGHFVA TSHRVRKVSE ERFAFPLFCA CDYTTRIAPI AGLPPRGERR YEPINCGDHL
FAQTAQTFRY LRERLEDGSL QLPDGAAGLS SFGHGYRAEK A
|
|---|
| |