Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2214 |
Symbol | |
ID | 8535378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2381763 |
End bp | 2383055 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646384595 |
Product | transposase IS111A/IS1328/IS1533 |
Protein accession | YP_003264077 |
Protein GI | 261856794 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.894475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCTC AACTCACACT TCAATCTGAC GGCGAATTTG CCGCCTTTAT CGGTATCGAC TGGGCAGATA CCAAGCATGA CATTTGTCTG CAGGCTGCGG ACGGCGTCCA GCGAGAGTTT GCTGTCCTGC CGCATCGCCC GGCTGACATT GATGACTGGG TGGTTACCCT GCGGCACAGA TTCCACGGCC GACCCGTGGC TATCTGCATC GAGACATCCC GTGGCGCACT GGTCTATGCA CTGCAAAAGT ATGATTTCCT GGTCCTGTTC CCGATCAATC CGGCCACACT CGCTAAATAC CGGCAAGCCT TCAAGCCCAG CCGTGCCAAG TCAGACCCAA CGGATGCACA GATCGCCCTG GAGATTCTCA TGAATCACCG GGATAAGTTG AAGCCACTTC GCCCGCAAAG CTCCGGCATT CGCACGCTGA CGCTGCTTCT GGAGGAGCGC CGCCAGATCG TAGACGAACA GCGGCGCCTC ACCAATCGCC TGATCAGCAA CCTCAAGCAA TACTATCCCC TGGCTCACGA GTGGTTCGAG AATAAGAACA CCACATTGTT CTGTGAGTTC ATGGCCCGTT GGCCTACCTT GAAGCAGTTG CGGCAAGCCC GCCGCAAAAC CCTGGAAGCC TTCTTCCGGG AGCACAACTG CCATCACCAC AAGCTGGTCG AGGAACGGCT TGCCAGCATC AAGAATGCGG TGCCGTTGAC CGAGGATCCC GCCATCATCA GGCCCAAACA ACTGCTGGTT GAAAGTCTGG TGGAACAGTT GCGGATAACA CTCAAGTCCA TTGCCCGCTT CGATGCTGAA ATCGACGCGC TGGCTCCAAC GCTTCCTGAT TATGACCTGT TCAGGTCATT GCCTGGCGCC GGACCGACAC TGGCTCCGCG CTTGCTGGTT GCCTTTGGTG AACAGCGCGA CCGCTATTCA AGCGCCGCCG AAATCCAGAT GTATGCCGGC ATCGCTCCGG TCACAGAGCG CAGCGGCAAG CAACATTGGG TGCACTGGCG AATGCAATGC CCGACATTTA TGCGCCAGAC CTTTGTTGAG TGGGCCGCAT TGACTATTCC CCGCTCCTAC TGGGCCAATG CCTACTATCG TCAGCAGCGC GCCAAAGGCG CAGCCCATCA GGCCGCGTTA CGCGCTCTGG CGTTCAAGTG GGCCCGCATC CTGTACCGCT GCTGGCTGAC GCGTACACCG TATGATGAGT CGAAATATCT GACTGCACTT AAACGCCGTG GCTCGACATT GCTGTCGCTG CCGGTCCTCA CGGAGGCCGC CCAAACAGCA TAA
|
Protein sequence | MKSQLTLQSD GEFAAFIGID WADTKHDICL QAADGVQREF AVLPHRPADI DDWVVTLRHR FHGRPVAICI ETSRGALVYA LQKYDFLVLF PINPATLAKY RQAFKPSRAK SDPTDAQIAL EILMNHRDKL KPLRPQSSGI RTLTLLLEER RQIVDEQRRL TNRLISNLKQ YYPLAHEWFE NKNTTLFCEF MARWPTLKQL RQARRKTLEA FFREHNCHHH KLVEERLASI KNAVPLTEDP AIIRPKQLLV ESLVEQLRIT LKSIARFDAE IDALAPTLPD YDLFRSLPGA GPTLAPRLLV AFGEQRDRYS SAAEIQMYAG IAPVTERSGK QHWVHWRMQC PTFMRQTFVE WAALTIPRSY WANAYYRQQR AKGAAHQAAL RALAFKWARI LYRCWLTRTP YDESKYLTAL KRRGSTLLSL PVLTEAAQTA
|
| |