| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2211 |
|---|
| Symbol | |
|---|
| ID | 8535375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2379831 |
|---|
| End bp | 2380967 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646384592 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003264074 |
|---|
| Protein GI | 261856791 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG TAGCTGCGAC TCTTAACAAC CCACCGCTAG GCATCCCCGA GGGCGAGCTG
CTCTTCAATC AGGTTCGAGA TGTTGTGCGC GATAAGCTTG CTCCTTTGAC TGTCAAAATT
GACGAGGGTT ATTACCCGGC TGAAGTCCTT AGGGCTCTGG GCGAAACCGG CGCCTTCTGC
CAGCATCTGG CCTCGCAAAA TGGCCGCGGT GAATTTGATA TCAATTCTGC CCTGAAGGCG
ATGGATATTG TCTCCCAGGA GTGCATGTCT ACAGGCTTTA TGGTCTGGGC TCAGAATGTG
GCGGCATGGT ACGTCGAAAT GTCAGCCAAC GATTATCTCA AGCGAACTCT TTTGCCCAAG
CTTGCCCGTG GTGAGGTTTT AGGTGGTACT GCACTCTCCA ACCCCATGAA ATATCTAGCC
GGTATTGAGC CCTTACTGCT CTCTGCAGTC GAAACAGAAG ACGGCTATCT TCTCAACGGT
ACCTTGCCAT GGGTGTCGAA TCTCGGTCCG GATCATTGGT TTGGCTCCAT TTTCAAGGTT
GGTGGCAATC AGCCGCGCGA TGTGATGGCC ATGGTTAACA CCTCCTGGCC CGGTGTGACA
TTGAAACAAC TGGCCAAGTT CTGTGGCATG GAAGGCACAG GTACTTATGC GTTGTCTTTC
AAAGAGGTAT TCGTACCCAA GAACCATGTT CTCGGTGATC CGCTGATACC CTATATCAAA
AAGATGAAGG CTGGTTTTGT GCTGATGCAA ACCGGCATGG CGACTGGTCT GGTTGAAGGG
TGCATCAAAC TGTGCGAGGA CGTAGAGCCC AAGCTCGGCC ATGTGAATTG TTATTTGGAT
GATCGCCCTG ACGAATTGCG CGAGGAGCTG GAAGATGCGC GCGATCTTAT CTCCAGTTTG
GGTGAAGATA TTTTCAACAA GGATGCGGAA TTCATGCGTA CGGTATTGGA GGCGCGGCTG
CTCGGGTCCG AGCTCTCCTT GCGCGCGGCA AATTCCGCCA TGTTGCACAC GGGAGCCAGT
GGTTATTTGC ACGACGCCCC AGCACAACGA AAGCTGCGCG AAGCCTACTT CGTCGCTATC
GTGACCCCGG CTACCAAACA CCTCCGCAAA GAAATCGATG CCATGGCGGC TCTCTAA
|
|---|
| Protein sequence | MTAVAATLNN PPLGIPEGEL LFNQVRDVVR DKLAPLTVKI DEGYYPAEVL RALGETGAFC
QHLASQNGRG EFDINSALKA MDIVSQECMS TGFMVWAQNV AAWYVEMSAN DYLKRTLLPK
LARGEVLGGT ALSNPMKYLA GIEPLLLSAV ETEDGYLLNG TLPWVSNLGP DHWFGSIFKV
GGNQPRDVMA MVNTSWPGVT LKQLAKFCGM EGTGTYALSF KEVFVPKNHV LGDPLIPYIK
KMKAGFVLMQ TGMATGLVEG CIKLCEDVEP KLGHVNCYLD DRPDELREEL EDARDLISSL
GEDIFNKDAE FMRTVLEARL LGSELSLRAA NSAMLHTGAS GYLHDAPAQR KLREAYFVAI
VTPATKHLRK EIDAMAAL
|
|---|
| |