Gene Hneap_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2170 
Symbol 
ID8535334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp2330561 
End bp2331226 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content55% 
IMG OID646384551 
Productcytochrome c class I 
Protein accessionYP_003264033 
Protein GI261856750 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAT CAGGTTTGAG TTCATCGCGT TTGCCCGTCG TGGCGCTTTT GTTCCGTCGT 
GCCGCATTGC CTATTGTGCT TGGTTTAGGC ATCACGTTGA CGGGAACCGC TGTTGCTCTG 
GCGGGTGGTA ATGTGGAAGC TGGGCTCGAG GCCAGTAAAA CATGCGCCGC CTGTCATGGT 
GCCGATGGCA ATAGCATGGT GCCCACGTTT CCTTCCATCG CGGGTCAGCC GGCTGGTTAT 
ATCGCGGAAC AACTGCACGC CTTCCGTGAC GGCAATCGCG TTAATGCCCT GATGAGCCCA 
CAAGCCAAGG CATTGACTGA CCAGCAAATC TTGGATTTGG CTGCCTATTT CGCTGCACAG 
AAAAGAGTGG TGAAAGCGGC ATCGACAGAA GATTCCATCC CCGGTGCGCA TTTATGGAAA 
TTTGGCGGCC ACTCGAACAC AGTGGCAGCC TGCGCAGCCT GTCATGGGCC ACAAGGGCAG 
GGCAATCAGC CGGCTGGATT TCCTGCGCTT CGTGGCTTGA CGCCGCAGTA CATTACGGAA 
TCACTAATAG CGTATCGCAA GGATGAGCGC AAAACTGAGC ACGCAAGCAT CATGGTCAGT 
ATTGCCAGCA AGTTGAGCGA CGATGACATC AAGGACGTGG CTCAACATAT CGCAACTTTC 
CGTTAG
 
Protein sequence
MSRSGLSSSR LPVVALLFRR AALPIVLGLG ITLTGTAVAL AGGNVEAGLE ASKTCAACHG 
ADGNSMVPTF PSIAGQPAGY IAEQLHAFRD GNRVNALMSP QAKALTDQQI LDLAAYFAAQ 
KRVVKAASTE DSIPGAHLWK FGGHSNTVAA CAACHGPQGQ GNQPAGFPAL RGLTPQYITE 
SLIAYRKDER KTEHASIMVS IASKLSDDDI KDVAQHIATF R