| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2165 |
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| Symbol | |
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| ID | 8535329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2323808 |
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| End bp | 2325190 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384546 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003264028 |
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| Protein GI | 261856745 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT CGGCAAAAAC GGATTACCGC GCCAAATACG AACAGTTGCT GGATGAGTTC
AGTTCGCTTG AAACCAGCGA GCAACTCCAG CAGAGTTTGT TGCGTAGCCT GCTTAACCGA
GTTTTGTTTG CGGTGGATAA AGCGTATCCC ACTCTGGCCA AAGAGAGTCA GGCGCTGCGC
GATCTCATGC GCCAGATCGG TGATGGACCG CTGCCTGTGG CCCGCATTCA ACCGGGAATC
GAGCATCTGG CCGAAGCCAT TCGAGCCATC GAAGCAGGTG ATCCGACCCC GGATCGCGAA
GAGGCGTTGA GTAACGACGA AGCGGCCGAG CGTGTGGACG TTCGGGATTT TCTTCCGCTG
TTACTGGAAC GGGTGGCCTT CACCGAGTCG ATGGAGGGCC GACGCGAAAA GCTCCTGGCT
ATTTTGAATA ATCCCAAAGA CAAGACCCTG AATTCCATCT TGATCGATCG TGCGGCCACG
CTAATCAACG ACATGCGTCG CGCGCTCGAA AATGAAAAAA ACGAGTTGAC CGAGTTCCTG
CGGCAGCTAA CGGAAGCCTT GTCCGAAATC GATCAACACA CGCTCGCCAA CCTCGGCGAT
ATCGAGACGC AACGCAAGGT TCAGGAAGCC TTGGGTAACG CGGTTACCGA GCAGGTGTCG
CACATTGATC GTACCGTTTC CGATGCGACC GATCTGGATG AACTAAAGCG TGTCGTTCGT
CAGCGAGTGG CACGGATCAG CGAGCAGATC GATACGTTTC GCAAGATGGA AGATAAGCGT
CTTGCCGCGG TCGAGTTGGA AAACAACCAG ATGCGTGAGC GCATCGCTAA GCTCGAAGCA
TCGCGTGTGG TGCTGCACGA GCAACTGGTT GCCAGCACAC AGAAAATGTT GCGTGATACT
CTCACCGGAT TGCCGAATCG TTTGGCCTTC GATGAGCGTG TAGCGCTCGA GGCGGCCCGG
ATGCAGCGTG AGAAAACACC TTTATGCCTA GCGCTTTGGG ATGTCGATTA TTTCAAGCGT
GTTAACGATA CCTTCGGCCA CCAAGCGGGC GACAAGGCCT TGCACGTCGT TGGGAAGACA
TTGAGTCAGT TGATCCGCGA TGTGGACATG GTCGCGCGCT ATGGAGGCGA GGAATTTGTG
ATGGTGCTGC CGAAAGCAGA CTTACAGCAA GCGTTCGTCG TGCTGGAGCG CATTCGGGAA
AAGCTGGCGG GCACTGCTTT CCGCTTTAAG GACACGCCGC TGAAAATCAC CTTATCCTGC
GGTGTCGCCG AGTTCGGTGC GGGTGAAACG ATTGAAAGCG TGATGGCCCG GGCCGATGAG
GCCCTGTATC GAGCCAAATC AAATGGCCGG AATCGTACAG AAATGTCGCA TTCTAAGCGG
TAA
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| Protein sequence | MNDSAKTDYR AKYEQLLDEF SSLETSEQLQ QSLLRSLLNR VLFAVDKAYP TLAKESQALR
DLMRQIGDGP LPVARIQPGI EHLAEAIRAI EAGDPTPDRE EALSNDEAAE RVDVRDFLPL
LLERVAFTES MEGRREKLLA ILNNPKDKTL NSILIDRAAT LINDMRRALE NEKNELTEFL
RQLTEALSEI DQHTLANLGD IETQRKVQEA LGNAVTEQVS HIDRTVSDAT DLDELKRVVR
QRVARISEQI DTFRKMEDKR LAAVELENNQ MRERIAKLEA SRVVLHEQLV ASTQKMLRDT
LTGLPNRLAF DERVALEAAR MQREKTPLCL ALWDVDYFKR VNDTFGHQAG DKALHVVGKT
LSQLIRDVDM VARYGGEEFV MVLPKADLQQ AFVVLERIRE KLAGTAFRFK DTPLKITLSC
GVAEFGAGET IESVMARADE ALYRAKSNGR NRTEMSHSKR
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