| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2148 |
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| Symbol | |
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| ID | 8535312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2309498 |
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| End bp | 2310166 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646384530 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003264012 |
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| Protein GI | 261856729 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00375326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCAA ACACAAATCT TGGGCATCTC GCGGGCGTAA CCGACACCAC TGAGCCTTGG
CGTCTGCTGG CCGAAACAGC GGATTTTCTG ATCATCGCCA AGCCCACGCG CATGCTTACC
CAACCGGGCA AGGAAGCGCA CAAAACCGAC AGCCTGATCA CCCGCGTCAA TCAGGAATTT
CCCGAAGCGC GGATCGTGCA TCGATTGGAC TGGGATACAT CGGGCGTGAT GGTGCTGGCA
CGGCACGCGC GAGCGCACCG CGCACTATCA ATCGCGTTTC AGGATCGACG CACAAAAAAG
TGTTACATCG CCCATGTCGA TCGCGCGCCC GCGCCGCCGC AGGGTTTGAT CGACCGGCCG
ATCGGCTCGG ACAGGGAACA TCGCCCCCGC TACCGGATCG ACGAGGAACA GGGCCGGCCT
TCCCAAACGC GTTATGTCGT GCTGAACGAA ACGGCGGATT TCGCTCGCCT GGCGCTGGAA
CCCATTACCG GCCGCTCGCA CCAGCTTCGG GTGCATCTGC TGTCCATCGG CCACCCGATT
CAGGGCGATA CGCTCTACCA CCCTCACGCA CAAAACCATG CCCGGCTCAT GCTCCATGCC
GAATCGTTGT CCTTTCCTGA CCCCGCAAGC GGAATCACGC AGACATTCAG CGATCCCGTC
CCCTTCTAG
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| Protein sequence | MNPNTNLGHL AGVTDTTEPW RLLAETADFL IIAKPTRMLT QPGKEAHKTD SLITRVNQEF
PEARIVHRLD WDTSGVMVLA RHARAHRALS IAFQDRRTKK CYIAHVDRAP APPQGLIDRP
IGSDREHRPR YRIDEEQGRP SQTRYVVLNE TADFARLALE PITGRSHQLR VHLLSIGHPI
QGDTLYHPHA QNHARLMLHA ESLSFPDPAS GITQTFSDPV PF
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