| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2139 |
|---|
| Symbol | |
|---|
| ID | 8535303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2298167 |
|---|
| End bp | 2299639 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646384521 |
|---|
| Product | Peptidase M23 |
|---|
| Protein accession | YP_003264003 |
|---|
| Protein GI | 261856720 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00671131 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAC GCCCCCTGTT TGCGACTACT CGAAAAAAAA CGCGCATTGC CCCTTGGATT
CGAGTCAGCG CCCTGATTTT AGGTGTTGGT TCGTTGGGCA TGGTCATAGC CAAGATTTCG
ATCCCGACCG ACCCTGCTCT TGATCAGCGC ATTGATCTGA GTATCGCCGA TGCGATTGCG
CCGACGCCGC CAGAACCCGA CCTCGTATCA CAATCGACAA ACAACGCCCC TTCCGCAGAA
TCCCCAACTT CCACAGCCTC GCTATTCAAT GAAGACCCGC TGCCCGACCC GGCACTCACA
CTGACCCTGC CTCAAACGCC ACCAGATGAA CCCACGGAAC CAGCACCGGT TGCTACCACC
ATCAAGGTCA AATCCGGTGA CAGCCTGTCG ACGATCTTTT CTCGTTTGGG CCTGAACTAT
CAGACAGTCT CAGACGTCAT TGCGGTCGGC GACCAAGCCG CACCGCTCAA GAATCTGCGC
CCTGGCGACC AGCTCAATGT AGAGTTGACA CCAGACAATC AACTGCTCGC CATCAACTAC
CAACTGGCTC CCAACAAGAC CCTAAGCATC CGCCGAGACG CAAACGACCA GTTCACCGCG
GACAAGATCG TTCTCCCGAT GGAAACACGC CTGACCACTG CGGAAGGCGT TATCGACAGT
TCTTTATACC AATCTGCAAT CGAATCGGGC TTATCCGCAA ACATGGTTAT GGAACTGGCC
GACATTTTTG GCTGGAAGAT CAACTTCCTG AAAGACGTCC AAAACGGTGA TCACTTCCGG
ATCGTGTATG AAGAGAAATA TGTCAACGGC AAGCATGTAG ACACCGGCGC TGTTGTCGCT
GCAGAATTCG TCAACAATGG CAAAACCTAT CAGGCCGTGC GTTATACCGC TCCAAATGGA
AAAACCGGCT ATTACGAACC CAACGGCGCG AGCTTGGCGC GCGGTTTTCT GCGTTATCCA
GTCGCATTTT CAAGAATCAG CTCGAAATTC AATATGCACC GCATGCACCC GCTCTATCAT
AAGATCAGGG CACATAAAGG CGTGGACTTT GCAGCGCCCA CGGGCACACC TATCCACGCC
GCAGGCCGTG GAAAAATCGA GTTTATCGGC TGGCAGCACG GTTACGGCAA GGTCATCAAA
ATCAAACATG ATGGCGGCTT CGAAACGGTT TATGGTCACA TGTCCCGCTT CAACAACCAG
CTAAAACGTG GCAGCAGCGT CGATATGGGC GAGACAATCG GCTACGTCGG GATGACAGGG
GCCGCAACCG GCCCGCATCT GCATTATGAA TTTCACGTCA AGGGCGTATA CACCGATCCG
CTGGTAGCCA AACTGCCGGA AGCCAACCCG ATTCCCTCGA AATATCGACA GGATTTCCTC
GCCCAGACAC AGTCCGCCTT GGATTTAATG GCCAAGGATG AGCGTCAGGC AGCACAAACC
GTAACGAACA CCGTCACTGC CACGGCGGAC TAG
|
|---|
| Protein sequence | MDSRPLFATT RKKTRIAPWI RVSALILGVG SLGMVIAKIS IPTDPALDQR IDLSIADAIA
PTPPEPDLVS QSTNNAPSAE SPTSTASLFN EDPLPDPALT LTLPQTPPDE PTEPAPVATT
IKVKSGDSLS TIFSRLGLNY QTVSDVIAVG DQAAPLKNLR PGDQLNVELT PDNQLLAINY
QLAPNKTLSI RRDANDQFTA DKIVLPMETR LTTAEGVIDS SLYQSAIESG LSANMVMELA
DIFGWKINFL KDVQNGDHFR IVYEEKYVNG KHVDTGAVVA AEFVNNGKTY QAVRYTAPNG
KTGYYEPNGA SLARGFLRYP VAFSRISSKF NMHRMHPLYH KIRAHKGVDF AAPTGTPIHA
AGRGKIEFIG WQHGYGKVIK IKHDGGFETV YGHMSRFNNQ LKRGSSVDMG ETIGYVGMTG
AATGPHLHYE FHVKGVYTDP LVAKLPEANP IPSKYRQDFL AQTQSALDLM AKDERQAAQT
VTNTVTATAD
|
|---|
| |