Gene Hneap_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2125 
Symbol 
ID8535284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2280965 
End bp2282242 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content56% 
IMG OID646384502 
ProductO-antigen polymerase 
Protein accessionYP_003263989 
Protein GI261856706 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGG ATCATCTCGC GCAAAATACG GTGTCATTAG TCAATCGACC GATGGACTGG 
GCGCAGAAAT TGGCGCTCAT TGCTGTGGTG CTCTTGCCGA TTTTAGTGCT ATTCAAGCGG
GTGCCCGCCG AAGTGGCCGT CGGCGTGACC GTGCTGATCG CGCTGTTCGT TGCGATTCGT
CGTCGGGATT TTTCCTGGCT GGCGCAAGGT TGGGTGTACG CGGCGGCGGC ATTGTCGGTC
ATCTTGCTCG CGCTCTCGCC TTTTTCCGTG AATCCGGCCA ACTCGGCCTT ATCCGCCGTT
CTGGCGTTCC GCTGGCCCGT ATTCGCCGCC GCGCTGATCT GGTTGTTTTC AAGGCAGCCC
AATACCTTGG TTTGGTTTGA GCGCGCCATG CTGGCCGTGA TTGTGTTTAT TGTGCTGGAT
ACCTTCCTGC AATATGTCAT CGGACGAGAT GTTTTCGGGC ACGCGCCATC CAGCTCGTTT
CGGCTGACCG GGCCATTCGA TCACCCGATG GTCGGCACGT TTACGGATCG GGTCTGGTTT
ATTGGGCTGG CGGTCGTCTG GTTCGCCGCA TTGCGATGGC GTGAACTCTG GGCATTGCTT
GCCATTGCCG GTATGTCGGC GATCGGCGCA TTATTCCTGT TTTTAACGGG CGAGCGCGCC
GCGTTACTGA CCTATCTTCT GGGTAGTGGT TTGGTGATGC TGGGCGTGAT GATTCACCAT
CGTCGTTGGC GTATGCCGCT GATCGGACTG CTCGTCGTGC TCGGTGTGGC CGTGACCGGT
GTGGCCATCA CCCAAAAAGA AATGGTGCAT CGCAGCGTGG ATTCGACGGT TCACACCATC
CAAAATCTGG ACGAGAGCGT GTATGGCTTG AACTTTATGA CGGCTTTTGC CGAATTTGAG
GCCAAACCTT GGACGGGCAT CGGCACGCGC GAATTCAAAG CCTATTGCGA TACCCATCTG
CCCGCCTACA AGGCCCGCTA CGACGCCATG GGTTTTGATG GCGCGGTGAT TCATCCGCAT
AATTTCTATA GCGGTATGTT GGCCGAGGGC GGCATTTTCG CTTTTGTCAT TTTCGTGACC
ATGGTGCTCT TGTTGTTCGC CAAAATGATT GGTGACTCGA TTCGTCACGG TGTGCCGATG
CAAGCTTATT TCGGTAGCGC CGTTTTGCTC ACCACATTCT GGCCGCTGCA AAGCACGATG
GAATATTTCA ATGGCTGGAC GGCGGCCGTG ATCTGGACGG GTGTGGCGTG GTCGATGGCC
CGTGCACGTG CAGCCTGA
 
Protein sequence
MNSDHLAQNT VSLVNRPMDW AQKLALIAVV LLPILVLFKR VPAEVAVGVT VLIALFVAIR 
RRDFSWLAQG WVYAAAALSV ILLALSPFSV NPANSALSAV LAFRWPVFAA ALIWLFSRQP
NTLVWFERAM LAVIVFIVLD TFLQYVIGRD VFGHAPSSSF RLTGPFDHPM VGTFTDRVWF
IGLAVVWFAA LRWRELWALL AIAGMSAIGA LFLFLTGERA ALLTYLLGSG LVMLGVMIHH
RRWRMPLIGL LVVLGVAVTG VAITQKEMVH RSVDSTVHTI QNLDESVYGL NFMTAFAEFE
AKPWTGIGTR EFKAYCDTHL PAYKARYDAM GFDGAVIHPH NFYSGMLAEG GIFAFVIFVT
MVLLLFAKMI GDSIRHGVPM QAYFGSAVLL TTFWPLQSTM EYFNGWTAAV IWTGVAWSMA
RARAA