| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2114 |
|---|
| Symbol | |
|---|
| ID | 8535273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2265503 |
|---|
| End bp | 2267269 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646384491 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_003263978 |
|---|
| Protein GI | 261856695 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGCCC AAATCGAACT TCGTCTGTTG AACGCCGTGC GCCTCATGCA AGAACAAGGC
GTGATGGACG CGGCCATCAA TGTGACACCC GCACTCACGG TGCCCAAAGA CCCCAGCCAT
GGCGATTTTG CCACCAACAT TGCCTTGCAG ATTGCTAAAC CCATGGGCGT GCCGCCGCGT
GTTGCCGCGC AGTGTCTGCT CGAGGCGTTA ACGGATCGCG AGGGGATCAA GCAGATTGAG
ATTGCAGGCC CTGGCTTTCT TAACTTTTTC GTCGATCCGG CGGCGGCGTT TGCTTTGATT
GACACCATCC TTGCAGCGGG GGGCACGTTC GGTCATTCGC GGTTTGGTGA AGGCAAAAAG
GTTCAGGTCG AATTCGTTTC CGCCAACCCG ACCGGCCCGT TGCATGTCGG GCATGGCCGT
GGTGCGGCTT ATGGTGCCGT GGTGGCGGAT TTGCTGGCGG CTGTTGGTTT CGACGTGTAC
CGGGAATACT ATGTGAATGA TGCTGGGCGG CAGATGCATA TTCTGGCCGT CAGCATCTGG
TTGCGTTATC TGGAAGCTTG TGGCGCCAAA CTAACTTTCC CCGCGAACGG CTATAAATCC
GAAGCGTACA TTTTCGACAT CGCCAAAGCG CTCAAGACCG AGCATGGCGA CACAATGTTC
GTGTCGACGG AGGATGTATT TACCAACCTG CCGCCGGATG AGCCGCAGGG TGGGGACAAG
GATGTATACA TCGACACCTT GATCGAGCGG GCAAAAACCC TGTTGGGCGA AACGCGTTAC
CGCACGGTAT TCGATGCGGG CCTGAACTCG ATTCTGGCCG ATATTCGCGA CGATCTGCGG
GAATTCGGCG TGGAGTATGA GCAATGGTAT TCCGAGCAGA CGCTGGAAGA TCGCGGCTTG
ATCGACCGCG CGATTGCCAA GCTGGAAGAG CGCGGCCAAA TCTACGAAAA AGAAGGCGCG
CTGTGGTTCA AATCGACCGA GTTTGGCGAC GATAAAGACC GTGTGGTGCG GCGTGATAAC
GGCCAAAGCA CCTATTTCGC CTCCGATATC GCTTATCACA TGGAGAAATT CGAGCGCGGC
TTTGATCGCG TGATCGATAT TTGGGGCGCG GATCACCACG GTTATGTGCC CCGTGTGAAG
GCGGCGCTGA CCGCGTTGGG GTTTGATGAG TCCCGGCTCG ACGTTTCCCT CGTGCAGTTT
GCGATCCTGT ATCGCGGTGG TGAGCGCGTG CAGATGTCGA CCCGTTCCGG CAGCTTTGTG
ACCCTGCGCG AACTGCGCCA GGAAGTCGGC AACGAGGCGG CCCGGTTCTT CTATGTCATG
CGCGCGGCGG CGCAGCATCT GGATTTCGAT CTTGATCTCG CGAAAAGCCA GTCCAATGAC
AACCCGCTGT ATTACATCCA GTATGCCCAC GCGCGGGTAT GCAGCGTATT CCGTCAGTTG
CCGCTGCGCG GATTTACCCA CGATGCCGAA AACGGCCGCA GCGCCTACGC ACGATTGACC
GAATCGCATG AGCAGGCGCT GTTCAAACGC CTCTCGCAGT TCGGTGATAC CGTGCAACGT
GCCGCCGTCA ATCTTGAGCC ACACCTGATC GTCCATTATC TGCGTGAACT CGCGCAGGAT
TTTCATGCCT ATTACAATGC GCACGCATTT CTCGTGGCCG ATGATGCGCC GTTGCGTGAC
GCGCGTCTGA ACTTGATTGC CGCCACGCGG CAGGTTTTGG CCAATGGTCT GGCGTTGCTC
GGCATGAGCG CACCGGAAGA AATGTAA
|
|---|
| Protein sequence | MKAQIELRLL NAVRLMQEQG VMDAAINVTP ALTVPKDPSH GDFATNIALQ IAKPMGVPPR
VAAQCLLEAL TDREGIKQIE IAGPGFLNFF VDPAAAFALI DTILAAGGTF GHSRFGEGKK
VQVEFVSANP TGPLHVGHGR GAAYGAVVAD LLAAVGFDVY REYYVNDAGR QMHILAVSIW
LRYLEACGAK LTFPANGYKS EAYIFDIAKA LKTEHGDTMF VSTEDVFTNL PPDEPQGGDK
DVYIDTLIER AKTLLGETRY RTVFDAGLNS ILADIRDDLR EFGVEYEQWY SEQTLEDRGL
IDRAIAKLEE RGQIYEKEGA LWFKSTEFGD DKDRVVRRDN GQSTYFASDI AYHMEKFERG
FDRVIDIWGA DHHGYVPRVK AALTALGFDE SRLDVSLVQF AILYRGGERV QMSTRSGSFV
TLRELRQEVG NEAARFFYVM RAAAQHLDFD LDLAKSQSND NPLYYIQYAH ARVCSVFRQL
PLRGFTHDAE NGRSAYARLT ESHEQALFKR LSQFGDTVQR AAVNLEPHLI VHYLRELAQD
FHAYYNAHAF LVADDAPLRD ARLNLIAATR QVLANGLALL GMSAPEEM
|
|---|
| |