| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2100 |
|---|
| Symbol | |
|---|
| ID | 8535259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2247894 |
|---|
| End bp | 2249294 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646384478 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003263965 |
|---|
| Protein GI | 261856682 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA CGCGAAAACT AGGTGAACGT GTTTTGATCG TTGAGGACAA CGATGGTCTG
TGCGGGCTGC TTGAAGAAGA ATTATGTGAT GCGGGCTATG TCGTCGGCAC GGCCACCACC
GCTGAGGCGG CTTGGGAGCA GCTGACCGGC GGGATGTGGG GGGTAGTGAT CAGTGATTTG
CGTCTTCCTG GCGCAGATGG GCTGACGCTT TTGCGTCAGG TGCAGCAATT AGCGCAGCCG
CCCGCGTTCA TCATGATCAC CGCCTTTGGC CGTGTCGATC AAGCGGTCGC GGCGCTCAAG
GAGGGTGCTG ATGAATTTCT CGTTAAACCG GTTGATTTAG AGCACCTGTT GCTCTGCGTG
CGCCGAGTGA GCGAGACCCG CCATCTGCGT CAAGAGTTGG CACGATTCCG CACCTTGTTC
CAAGACAGTG ACTTTCACGG CATGATCGGC CGCAGCCCGG CGATGCAAGT ACTTTATGCA
GAAATCAAGC AGATCGCTCG GGCTTCGGGG CCAGTGCTAA TCACGGGGGA GAGTGGGGTT
GGCAAGGAGT TGGTGGCGCG CGCGTTACAC CAAGAAAGTG AGCGCATCAA CGGTCCCTTG
GTACCTGTTA ATTGCGCGGG CATACCCGCC GAGCTTCTGG AAAGCGAGTT GTTTGGCCAT
GCTTCGGGTG CGTTTACCGG CGCGCAAAGG GCACGTCGCG GTCTAATCAG CGAGGCCGAC
GGCGGCACTT TATTGCTCGA TGAAATCGGC GAGCTGCCAA TGACGATGCA AGCCAAGCTG
TTGCGCGTGC TCCAGGATCA GCGAGTCCGC CCGGTTGGAT CGAATCAGGA GCAGTCTATC
GACCTTCGCG TTATCGCCGC CACCAATCGC GATCTGGAAG CTGAAGTTGA AGCTGGCAGT
TTTCGTGAGG ATTTGTTTTA CCGGCTTAAC ACCTTCACCT TGAAGGTGCC GCCATTGCGC
GAGCGCGGTG ATGACCTGAC GGTATTGGCG GCACATTTTA TTAATCGATT CAGTGCACAG
TTGGGGCACC CGATCAATGG GCTTAATAAT GAAGCCGTGC GTCTGTTGAA CGCCTATTCG
TTTCCCGGAA ACATCCGCGA ACTGGCTAAC GCCATGGAAC GGGCGGCTAC CTTTTGCCCG
GATTCGGAAA TCTGTGCGGC TCATCTGCCC GAAACGATTC GGCAGGCCAC TGGCACGGGA
CTCGATCCGG CACTGACGCA AGTTTTGTTG CCGCCGTCAG GTTTGCCGGC TCTGGATGAG
ATTGAGCTGC GCTACATTAA TCACGTACTC ACTCAAGTAC GCGGTAATAA GCGCCGCGCC
GCCACCATCT TGGGCATCAG CCGCCGTACG CTTTACCGGC GACTCGGCGA AGACGATGGC
AATGTCGCTG ATGGCGCATG A
|
|---|
| Protein sequence | MTETRKLGER VLIVEDNDGL CGLLEEELCD AGYVVGTATT AEAAWEQLTG GMWGVVISDL
RLPGADGLTL LRQVQQLAQP PAFIMITAFG RVDQAVAALK EGADEFLVKP VDLEHLLLCV
RRVSETRHLR QELARFRTLF QDSDFHGMIG RSPAMQVLYA EIKQIARASG PVLITGESGV
GKELVARALH QESERINGPL VPVNCAGIPA ELLESELFGH ASGAFTGAQR ARRGLISEAD
GGTLLLDEIG ELPMTMQAKL LRVLQDQRVR PVGSNQEQSI DLRVIAATNR DLEAEVEAGS
FREDLFYRLN TFTLKVPPLR ERGDDLTVLA AHFINRFSAQ LGHPINGLNN EAVRLLNAYS
FPGNIRELAN AMERAATFCP DSEICAAHLP ETIRQATGTG LDPALTQVLL PPSGLPALDE
IELRYINHVL TQVRGNKRRA ATILGISRRT LYRRLGEDDG NVADGA
|
|---|
| |