| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2095 |
|---|
| Symbol | |
|---|
| ID | 8535254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2242722 |
|---|
| End bp | 2243465 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646384473 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_003263960 |
|---|
| Protein GI | 261856677 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00900618 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAC TGGCCGGACT AACGCGGTTT CTGGTGCCTG CGCCCTGCTA CCTGTGCGGA
ACGGCAAGTG TGGCGGTCGA TGGGTTGTGC GCCCGATGTG CCGACGATTT ATCGACAGAA
AACAGGGCGG TGCCGCACCG TTGTCCGCAA TGTGCGATTC AGGTGAGTGA AGCCGGGCAA
CGGTGTGCTG CGTGCTTGCG GCATCCGCCG AGTTTCGATT TTTCGGTCGC GGGGCAGGAT
TTTAAGACCG CAAGCCGATT TCTGATTCAT CAGTTCAAAT ACCGTAAGGA TTCGGGCGTG
CTCGATGCGT TGATGCGCGC ACTTTTTTCT TCTATTGAAC GAGCTTATCC CCAGCGACAG
GATGACTCGA AAGACTGGCC AGATGTGTTG ATCCCAATGC CCATTCATCC CGATCGGCGG
CGGGTTCGTG GATTCAATCA GGCACGCTTG ATTGCCGACC GGGTCGGAAA TCGTTTTGAT
TTGCCCGTTC ATGGAAAGGC GGTGATGCGT TCAGGGTCGA GTAAATCTCA AAGTGGGTTA
TCTGCCATTG ATCGCCGAAA AAGCCTGAAA AACGCCTTCG AGGTAAGGGA GCATTTGCCT
CAACATGTCG CGATTGTTGA CGATGTGATG ACGACGGGTA GCTCGGCCGA TGCGCTGGCC
TATGCCCTAA AACGGGCAGG GGTGGGGCGA GTCACCGTAT GGGTGTTGGC GCGAACGCCC
GCACCCGGTG ATATTCCCCG TTGA
|
|---|
| Protein sequence | MNRLAGLTRF LVPAPCYLCG TASVAVDGLC ARCADDLSTE NRAVPHRCPQ CAIQVSEAGQ
RCAACLRHPP SFDFSVAGQD FKTASRFLIH QFKYRKDSGV LDALMRALFS SIERAYPQRQ
DDSKDWPDVL IPMPIHPDRR RVRGFNQARL IADRVGNRFD LPVHGKAVMR SGSSKSQSGL
SAIDRRKSLK NAFEVREHLP QHVAIVDDVM TTGSSADALA YALKRAGVGR VTVWVLARTP
APGDIPR
|
|---|
| |