| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2087 |
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| Symbol | |
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| ID | 8535246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2234193 |
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| End bp | 2235374 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384465 |
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| Product | Peptidoglycan-binding lysin domain protein |
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| Protein accession | YP_003263952 |
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| Protein GI | 261856669 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCGT CAAAAGGATT ACCGGTTCTA CTCTCGTTTT CCCTCATTAC CACCGCGTTG
CTGTCCGGCT GTGCTTCCGA GCGTCCGCCC GTCAATATCG TCAACCAGCC CGCGCCGGAT
GGACTGCCGC TTGGCGCCAC GCGCGGCCCG GTCAAAGGCA CGCTGACTCC GGAAGAAACC
AAGGCACAGT TCATTTCGCT CAAGGCCAAT GAATACACCG TCAAGAAGGG TGACACACTC
TGGTCGATCG CCAACCACTT TCTGAAAGAC CCGTATTACT GGCCTGAAAT CTGGTACGAC
AATCCCGAAA TCAAAAACCC GCACAAAATT TACCCCGGCG ACAAGATCGG CATCATGTAC
ATCGGCGGCA AACCACGCTT GGGCATCGCC ATGCGCCCCC ATATTCGCTA CGAGACCCTG
CCGCCCGCAA TATCAGCCAT CCCGCTGGAA GATTTAAAGC CGTTCTTGTC GTATGACCAG
ATCATGTCGG AAAAACAATT AGAATCGGCA CCTTATGTTC TAGCAAATCG CAATCAAACG
ACGACGACCA GCTTCGGTGA TGTCGTCTAT GCACGCCCGG CCCTGACGGA GAACTCGAAT
ACGTTCTCCA TTCTCGGCAA GGGCAAACCG CTGGTTGATC CAGTGACGGG CGACTTCTTG
GGCTATCGCG CCATCTACAA AGGCCAGGCT GAGGTGATGC ATCGCGGTGA CCCGACCACG
TTGCGCATCA CCAAAAGCGC CCGCGAGATT ATGGATGGCG ACCGCGTATT GCCGGTTATC
AGCGAGCCGT TCAATAAGGA TGTGACGCCC AGTATCCCGG CGGTTCCAAT TGATGCGGTT
GTGATCGACA TCCCCGATGC CATCACGCAA GTGGCCACTT ATCAGGTCGT GATTATCAAC
GCCGGCAGCA ACAACGGTCT GGTTCCTGGC GATATGCTGC GCATCAGCAA GCCTGGCCAA
ATTGTAAGTG ACAAGTACAC AACCAACCCC AAAGAGCTGG CAAAAAACGC CGAGCCTGAA
GGCTTTGAAA TTCCATCGCC ACCCAGAGTC AAGTTGCCCG ACTTCCCAAT CGGCACCGCC
ATGGTCTTCC GTGTGTATGA TCGTGCCGCC TTGGCCCTTG TGGTACAGAC CAAGCGGCCT
GTGCGCATTG GCGATTTGCT GCAAACCCCA ACGGCCGATT GA
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| Protein sequence | MRSSKGLPVL LSFSLITTAL LSGCASERPP VNIVNQPAPD GLPLGATRGP VKGTLTPEET
KAQFISLKAN EYTVKKGDTL WSIANHFLKD PYYWPEIWYD NPEIKNPHKI YPGDKIGIMY
IGGKPRLGIA MRPHIRYETL PPAISAIPLE DLKPFLSYDQ IMSEKQLESA PYVLANRNQT
TTTSFGDVVY ARPALTENSN TFSILGKGKP LVDPVTGDFL GYRAIYKGQA EVMHRGDPTT
LRITKSAREI MDGDRVLPVI SEPFNKDVTP SIPAVPIDAV VIDIPDAITQ VATYQVVIIN
AGSNNGLVPG DMLRISKPGQ IVSDKYTTNP KELAKNAEPE GFEIPSPPRV KLPDFPIGTA
MVFRVYDRAA LALVVQTKRP VRIGDLLQTP TAD
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