| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2085 |
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| Symbol | |
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| ID | 8535244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2233318 |
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| End bp | 2233833 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384463 |
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| Product | peptide deformylase |
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| Protein accession | YP_003263950 |
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| Protein GI | 261856667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.444922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTAC TTGAAGTGTT GCTTTTCCCC GATGAGCGGT TGCGCCGGGT GGCTGCCGAA
GTGAAGCAGT TTGATGCGCG CGTGCAGCGC CTAAGTGAGC AGATGCTGGA AACCATGTAT
GACGCTCGCG GCGTCGGGTT GGCCGCGACG CAAATCGACG TGCATGAACG AATGTTTGTG
GCGGACTGTG CCGAGGACGG ATGTGCTCCG GAGCCATTGG TGTTCATCAA CCCTGTGATC
CTTGATCGCA GTGGCTCGGT CGAATCGGAA GAGGGTTGTC TTTCGATCCC CGGTGTCACT
GATAAAGTGA TGCGTGCCGA AGCCGTTCGT GTGCGCGCTC AGAATGCCTT CGGAGAGAGT
TTTGAACGTG AAGCCGGCGG TTTGCTGGCC ATCTGCATTC AGCATGAAAT AGATCATCTC
GATGGGCGCC TTTTTATCGA TTATCTCTCG CCGCTCAAGC GCCAGCGCAT CCGCAAAAAA
CTCGAAAAGG CGTTGCGTCA GAAGGAATCA GCATGA
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| Protein sequence | MSLLEVLLFP DERLRRVAAE VKQFDARVQR LSEQMLETMY DARGVGLAAT QIDVHERMFV
ADCAEDGCAP EPLVFINPVI LDRSGSVESE EGCLSIPGVT DKVMRAEAVR VRAQNAFGES
FEREAGGLLA ICIQHEIDHL DGRLFIDYLS PLKRQRIRKK LEKALRQKES A
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