| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2084 |
|---|
| Symbol | |
|---|
| ID | 8535243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2232386 |
|---|
| End bp | 2233321 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646384462 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_003263949 |
|---|
| Protein GI | 261856666 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.198796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGC GCATCATCTA CGCGGGCACG CCCTTCTTTG CCGTGCCCGC TCTCCAGGCC
TTGGCTGCGG ATGATTCAGT CGAATTGGTG GCGGTGTACA CGCAGCCCGA CCGCCCTTCT
GGTCGTGGGC AGAAATTAAC GCCGTCGCCA GTGAAAGAAG CCGCGCTGGC CCTCGGAATT
CCCGTTGAAC AGCCGCTTAC TTTGCGTGAT GAATCGGCAC AGACCGCGCT GGCCGGTTAC
CGACCCGACC TCATGGTTGT TGCCGCCTAT GGCCTTATTC TCCCGGTACC CGTTCTTAAG
ACACCGCGAC TAGGCGCAAT CAATATTCAC GCCTCGTTGT TGCCGCGCTG GCGTGGCGCG
GCCCCTATTG CGCGCGCCAT CGAGGCGGGT GATCCGGTTA CTGGCATCAC GATCATGCAG
ATGGCCCAGG GCCTGGATAC CGGCGATATG TTGCACAAGG TCGAGCTGGC CATTCGGCCA
ACCGATACAG CGGCCACGCT GCATGATCGA TTGGCTGAAT TGGGCGCGCA GGCTTTGATG
GCCGCGTTGC CCGGTATCGT CGCGGGTTCA ATCACGCCCG AGCCGCAGGA CGATACCCAA
GCCTGCTATG CGGCGAAATT GAACAAAGCC GAAGGCCGAC TCGACTGGCG CGAGCCGGCC
GACCTGCTGG CACGCCGCGT TCGCGCGTTC GATCCTTGGC CGGTTGCGTA TACCGAGTTT
AAGTCTGCCC CATTGCGAAT CTGGTCCGCA GAAGTTGAAC CGAGCAGCCC GCAAGCCCAA
CCCGGTACGG TGGTAACGGT TGATGCCTCG GGGTTTGTTG TTTCGACCGT CGCGGGGGGA
TTGCGGGTTC TAGCCTGTCA GCAGGCGGGT GGAAAGCGGA TTTCTGCTGC TGATTTCGCG
CGTAACCATC AACTGCTGGG TGCCTGTTTT GACTGA
|
|---|
| Protein sequence | MTVRIIYAGT PFFAVPALQA LAADDSVELV AVYTQPDRPS GRGQKLTPSP VKEAALALGI
PVEQPLTLRD ESAQTALAGY RPDLMVVAAY GLILPVPVLK TPRLGAINIH ASLLPRWRGA
APIARAIEAG DPVTGITIMQ MAQGLDTGDM LHKVELAIRP TDTAATLHDR LAELGAQALM
AALPGIVAGS ITPEPQDDTQ ACYAAKLNKA EGRLDWREPA DLLARRVRAF DPWPVAYTEF
KSAPLRIWSA EVEPSSPQAQ PGTVVTVDAS GFVVSTVAGG LRVLACQQAG GKRISAADFA
RNHQLLGACF D
|
|---|
| |