| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2081 |
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| Symbol | |
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| ID | 8535240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2227852 |
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| End bp | 2230302 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384459 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003263946 |
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| Protein GI | 261856663 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTCG TCGGCAGCTG GGGCCAGATC TACACGCGTT GGATTCGCCG ACTGATCCCA
CCGATCAGCA TGATGGTCGT CGTGCTGCTG TTGATTCTGA TGTATCTGAT TTCAGAATCA
CTTCAGCGGG CAAACCAACC GGAGCATCTC TATCTTTCCC TGTTGGGACT GTCTGCGCTG
GGGATTTTGT TCCTGGCGGC GGTGGTGCTC GGGCATATCA TCCGGTTGGT CAGCCATTAT
CGGCGCGGTG CGCCCGGTGC TCGGCTGACG GCGCGATTGG TGCTCACGTT TGTCGGTCTG
ACTTCGATCC CCGTGCTTAT CGTGTTTTAT TTCTCCGTGT CGTTCATCCA ACGCGGGATC
GATTCCTGGT TCGACGTGCA GGTCGAGCAG GCGATGTCGG ATGCGCTTTC GTTGTCGCAA
TTGGCGTTTG ATGGACAGAT GCGCACGGCC ATGAATGAAA CCATGCGCGC AGCCAAGCAA
CTTAAAGGCG TATCGGGTGA TCTGGTTGCA CTGGATTTGA ATGCGGTGCG CCGCAATACC
GGTGCCCACG AGATGACGAT TTTCGGTTCA CGGAACCTGA TTGTGGCATC CGCTTCCGAT
GATTTGCAGG CGATCGTGCC TTCCCGTCCG GACGAAACGG CACTGAGCCA TGCGCGCGCA
GGGAAGGACT TCATCGGTCT TGATCCTGGG GGCGGAGACT CCATGCGCAT CCGGGTTGTT
GTCCCGCTGA CCGCAGGGCT GACCGGTGAT GGCAGTAGTG AAGTCCTGCA GGCGCTGTAT
TCCATTTCGC CTCGAGCAAA CCAGCTTTCG AGTAGCGTGC AGGCTGCCTT CAATGAATAC
CGCTCGTTGA TTTTTCTGCA CAAATCACTG AAAAAGACCT TTACCTTTGC GCTTACCTTG
GCGCTGCTGT TGTCCCTTTT GACTGCGGTA TGGCTTGCCT TTATCGCTGC GCGGAGGTTG
TTGGCGCCGA TCCGTGAACT GGCGGCCGGT ACGCGCGCAG TGGCCGAGGG TGACTATAGC
CTGCGTTTAC CCGTGGATCG TCGTGATGAT CTGGGTCAAC TGGTGCAGTC GTTCAATACA
ATGACGGCAC GGGTGCGCCG CGCTCATCAG GTGATGCAGC AACTTCAGGA AGTGGCGGAC
CAGGAGCGCG ATTATCTTGA AACAGTGATT CAACACCTTT CATCCGGCGT GTTGACCCTG
TCGCCCGATG GCCGCATTAC ACGAAACAAT TCCGTCGTCA CACAACTTTT AAGCATTACC
AGTCAGCATA TTGATGGGTG CACTCTGACC GAGATCTGTC AGATATATCC CCATCTGGAG
CCGATCTGTG CTGCTTTCGG TCATCTTCTG GAGCCCGGTC AATTGCCGGC TGGTGCCACT
GTTGAGGCTC AAGTCCGCAT TATGGGCGAC GCCGGGCGAC GCATCCTGTT GAGTCGGGTT
GCCGCACTGC CCGCCGATGA TGTGACCGGT GGTTTCGTTC TGGTTTTTGA AGATGTGACC
ACCTTGATTC AGGCTCAGCG CGATGCGGCC TGGTCCGAGG TGGCGCGTCG GTTGGCGCAT
GAAATCAAGA ACCCGCTTAC GCCCATTCAG TTGTCGGCGG AGCGGTTGCG TCGTCGGTTG
TTGGGTAATC TCAGCGATGA GCCTGCCCAG ATTCTGGATC GCTCGACCCA AACCATCATC
AATCAGGTCG AGGCAATGAA GTTCATGGTG AATGAATTTG CCGAATATGC GCGTTCGCCG
CAAATCACCC TAAAAATTCT GGATCTGGAT GAGTTGGTCT CGGAGGTTAT CGATTTGTAC
AAAGGCGGCG ACATCCCCGT ACTGCATCGA TCCGCCGGGC ATCCGCTGCC GGTGCGTGCC
GATGCAGGAC GCATCCGGCA GGTGTTGCAC AACCTGATCC GCAATGCGCA ACAGGCAATG
ACCGAGCAAG GCTGTCCCGG GTCCGATGAG CCCGAGGTGA CGCTATCGAC CGGCTTGCAT
CAGGAAGGCG GTTTGGTTCT GGTTGAGTTG ACCGTGACCG ATAATGGCAC GGGATTCCCG
GAAGATATGA TTGATCGCCT GTTTGAGCCG TACACCACGA CACGACCCAA GGGATCGGGA
CTGGGTTTGG CGATCGTGAA GAAAATCGTG GAAGAGCATA GCGGTATGGT GCTGGCTTCC
AATGTGCAGG ATGGACCTGT CGAATTGCAA GGTGATATCC CAGCGCGGGG TATGGCCACT
GCGAAAACAG GCGCGCGCAT TGTGATTCGG TTACCCTTTG CACTTCCCGA CCTACCGATG
GATACGAACA GGGAGACGGC ATCGCCCAAA TCATCGGTCT TGACGGGGTC GAAGGAAGAT
CGTCCCGAAA CGTCTCCCGC TGATTCGACA AGTAGGCATA ATGCCCCAAG GGACTTGTTC
CGCCGGATGG ATGACACCCG TGCGGAATCC GATTTAGATC ATTCAGGATA A
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| Protein sequence | MKFVGSWGQI YTRWIRRLIP PISMMVVVLL LILMYLISES LQRANQPEHL YLSLLGLSAL
GILFLAAVVL GHIIRLVSHY RRGAPGARLT ARLVLTFVGL TSIPVLIVFY FSVSFIQRGI
DSWFDVQVEQ AMSDALSLSQ LAFDGQMRTA MNETMRAAKQ LKGVSGDLVA LDLNAVRRNT
GAHEMTIFGS RNLIVASASD DLQAIVPSRP DETALSHARA GKDFIGLDPG GGDSMRIRVV
VPLTAGLTGD GSSEVLQALY SISPRANQLS SSVQAAFNEY RSLIFLHKSL KKTFTFALTL
ALLLSLLTAV WLAFIAARRL LAPIRELAAG TRAVAEGDYS LRLPVDRRDD LGQLVQSFNT
MTARVRRAHQ VMQQLQEVAD QERDYLETVI QHLSSGVLTL SPDGRITRNN SVVTQLLSIT
SQHIDGCTLT EICQIYPHLE PICAAFGHLL EPGQLPAGAT VEAQVRIMGD AGRRILLSRV
AALPADDVTG GFVLVFEDVT TLIQAQRDAA WSEVARRLAH EIKNPLTPIQ LSAERLRRRL
LGNLSDEPAQ ILDRSTQTII NQVEAMKFMV NEFAEYARSP QITLKILDLD ELVSEVIDLY
KGGDIPVLHR SAGHPLPVRA DAGRIRQVLH NLIRNAQQAM TEQGCPGSDE PEVTLSTGLH
QEGGLVLVEL TVTDNGTGFP EDMIDRLFEP YTTTRPKGSG LGLAIVKKIV EEHSGMVLAS
NVQDGPVELQ GDIPARGMAT AKTGARIVIR LPFALPDLPM DTNRETASPK SSVLTGSKED
RPETSPADST SRHNAPRDLF RRMDDTRAES DLDHSG
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