| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2072 |
|---|
| Symbol | |
|---|
| ID | 8535231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2218620 |
|---|
| End bp | 2219090 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646384450 |
|---|
| Product | sulfur oxidation protein SoxY-like protein |
|---|
| Protein accession | YP_003263937 |
|---|
| Protein GI | 261856654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5501] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTA ATCGTCGTGT ATTTTTGAAA GGCAGCATGG CTGCCAGTGC AGTTGGCTTG
GCTGTTGGCG CCGGCCTGTT GACCCCCCGC GCTGTTTTGG CCGCTACCTG GCCAGAAAAA
GCATACAGCA CCAAAGGCTT TGACGAGTCT CTGAACGATC TGTTCGGCGT TTCTGGCGCG
GCAGAATCCA AAGATGTCAC CGTGAAGGCG CCTGATATCG CTGAAAACGG TGCGGTTGTT
CCTGTCACCA TCGAATCTGC TGTTGCCGGT ACCGACAACA TCGCGATTCT GGTTAAAGGC
AACCCGACCC CTCTGGTCGC CAACTTCAAG TTTGACGGTG CCCAGCCATT CGCTTCTACC
CGTATCCGTA TGGGCAAAAC CGATAACGTT ATCGGCGTAG CACATGCCGG TGGCAAGCTG
TACATGGCTG AGAAGCAAGT TAAAGTAACC ATCGGCGGTT GCGGCGGCTA A
|
|---|
| Protein sequence | MQSNRRVFLK GSMAASAVGL AVGAGLLTPR AVLAATWPEK AYSTKGFDES LNDLFGVSGA
AESKDVTVKA PDIAENGAVV PVTIESAVAG TDNIAILVKG NPTPLVANFK FDGAQPFAST
RIRMGKTDNV IGVAHAGGKL YMAEKQVKVT IGGCGG
|
|---|
| |