Gene Hneap_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2066 
Symbol 
ID8535225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2208018 
End bp2211521 
Gene Length3504 bp 
Protein Length1167 aa 
Translation table11 
GC content54% 
IMG OID646384444 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_003263931 
Protein GI261856648 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.082343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCAAA AACACCCAAA GCCGCTGCTG CCGATCAATG AAACCGAGCG TTTGCAGGTC 
ATGCGCGAAC TTGAGTTTCT GAACGATGAA AGCAATGAGT TTTATCTGCG CAAACTCAAA
ATTGTTCGGC GTGTGTTTGA TGTGCCCATC GCGTTAATCG CGTTAACCGA TGCGCATTTT
CAGCGTTTCA AGGCAGTGCT TGGGCTTGAT ATTGAGTCTA TTGAACGCGA TTTGGCGTTG
TGTTCATTCG CACAAGTTCC GCCCTATGGT CCACTCGTAA TACCCGATAC GCTTCAGGAT
CTACGATCCA AAGAATCCGA GCTGGTAACA GGGCATCTGG GGGTGCGTTT CTACGCCGGC
GTGGCGCTTG TTTTAGACGG GCAGTTTGCC GTGGGCACGC TATGCATCAT GGACACGCGG
CCTCGGTCGC TTTCTGCCGA TGAGCAAATC TTGCTCAAAG ATTTTGCGCT CAACTTGACC
CAAGTGCTGC AAGCCAAACT CGATGCCGAG CGAAACACGG TGCTGCAAAA ACAAAGCGCC
CGGGTCGGCT TGGAACTCAA TGCCATTTTA CAAACAGCCG CGATTGGGAT TATTCGCATT
GATAAGCGCG GAGTGATTGA GGCGGCCAAC CCCAAATCTC TTGAGTTGTT TGGTTATACC
GAGCCGGAAT TGATCGGGCG AAATGTGTCC ATGCTCATGC CCGAGCCATG GCGCAGCGCG
CATGATGGGT ATTTGATGCA GTTTTTAGCC ACGCGCGATG CCAAAGTGAT CGGAATTGGC
CGTCGGGTGG ATGGCGAGCG CAAGGATGGG TCGCGTTTTC CATTTAATTT GGCGGTCAGT
GAACTGCGAA TAGATGGCGC AAGTCAGTTT GTGGGGTTTG TGTCGGATGT CAGCGAGCAG
GTAGAAGCCG AGCATGCTTT GGAGCGCGAA CGGGCGTTGC TGCGCTCGGT GATCGATAGT
TCGAGCAATC CTATTGCCGC CGTCAATGCC GCCAATGAGT TCATTCTTCT CAATACATCG
TTTGCTCGCC TTCTTGCCAA ACCCGTCGAA GCCGTGCTGG GACAAAAGTC TGAACTTTTT
TTGCCGCCTC AAGCCATAAA GATTAACCGT GAAACCAATG CACGTGTTTG GGCTTCCGGC
TCATCGATTT CCACGCGAAC GCCGATCGAG ATAGCGGGCC GGATGCGTGT TTTCGAAACC
AATAAATCCC CTTTGCGCGA TGAGCGCGGC AAGCAAATCG GTGTGGTAAC GATTGCTCAG
GATGTCAGTA AACTCGATCG CATCACCTCC GATTTAATGG CGATGCAGCA ATTGCGTGAT
ATGAGCGAGC GCTTTGGTCA AAGCGGATCG TGGGCAATGG ATCCGCTCAC CGATCGGGTG
AACATCAGTG CCGGTTTTGC CCGTTTGCTG GGGTTGGCGC CCGAAACGAC GCATGCGGAT
CGCGAGATTA TTTATGAACG GGTTCACCCC GATGATCGCG CCATTATTGA CGCGGCATTC
ACGCAAACAT TATCTGAGGG GCAATCGATT CGGTTTGAGT ATCGTGTGCG CGATGCCCAT
GGCGACTGGC GTTATCTTCG TGCGCGGGGG AATGCAGAAT TAGCTGAGAA CGGTCAGGTG
ACGCAGTTTG TCGGCATCAC CCAGGATGTA ACCGAAGAAG TTCGTGCCCA AGAAAAAATG
GATGCACAGC AGCAGCTCCT CAGTGGGCTC AACAAGGCCG TGCAGTCTTT TTTAACCACC
GTGGCCGGCG ATAAAAACGT CTGGGCACAA TTGCTTCAAG AGCTGCTTGC CGTTACCGAT
GCCGAATTTG GCTTTATTGG CGAGGTGCTT TACGGCATTG AATCGACGCC GTGTTTGAAA
ATCCACGCCA TTACCAATTT ATCGTGGAGT GCCGAGTCCG ATGCGCTCTT CGAGCGCGTG
ATGGCAGGCG ACATGATGTT CTGCAACCCC GATAACCTCA TCGGCGAGGT TATGAAAAGC
CGTGCGCCGG TGATCGTGCC TGAACTGGCG ACCGATTCGA GGCGCGGTGG TTTCCCGCCG
GGGCACCCGT TGTTGAGCAA CTACCTCGGT ATACCGCTGT TTCGGGGTGA TGAATTGGTG
GGCGTGTTGG CGGTTGCCAA TCGAAAAGCG GGCGTCGGCC ATGATCTGGT GGACTTTTTA
ACCCCTTTTA CCAGCTCCTG CGCCATTTTG ATTGTGAGCC TGCGCCAGCA ATTGGAGCGC
ATTAAATTCG AGCAGGCCCT CGTTGAAAGT AAACAGGCGG CCGATCGCGC GAACAAAGCA
AAATCGATGT TTCTTTCCAG CATGTCGCAT GAGTTGCGCA CGCCGCTCAA TGCCATCCTC
GGTTTTGCCC AGTTGATGGC GGCCAGCCGC CGGGAGCCAT TGACCGAAAA GCAAAATGGA
TTTGTCGCCC ACATTCTCAA GGCGGGTCAG CATTTATTAA CGCTGATCAA CGATGTATTG
AATCTGGCAA AAATCGAAGC CGGCGAGATG ACACTCTCGC CGGAAACGCT GGATTTGGGT
GTCATTTTGC GCGATGCGCT GGATATGGTG GCGGATAACG CCGCCTCGAC CGGCATCGCG
TTGTTCAATG AATTCAATGG TGAGCATAGC TCGCCAGAGC CGTTGTTGAT TTGTGCGGAT
TTAACCCGAT CACGCCAAGT GCTGCTGAAC ATATTGACGA ATGCGATCAA ATATAACCGC
CCAAGAGGCT CGGGCGGCCC GTACAGCCCG GATAACTTGG GGGGCTCGGT TTGGGTGCGC
CGATTACCCA GTTACCAAAA CGATGCGGGT AACTGGATGC ATGGATTGGC GATTGAGGAC
ACGGGCATGG GCATACCGGC CGCGCAGCAA CATCGCCTGT TTCGCCCCTT TGAGCGCTTG
GGCCAAGAGG CTGGCACCAT TGAAGGCACC GGGATTGGCT TGCTCATCAC CCGCCAATTG
ATCGAGTTGA TGCAGGGTCG AATTGATTTT GAAAGTGAAG AAGGCAAAGG CACCACCTTT
TTTGTGTGGT GGCCGGCGGT TCGAGAAGAC CAAAACGACA CCTGCGGCGA GCGGCCCGAT
GTAAAGAACG CGAATGAACC GCTTGCATCC AAACATACGT CGTCGGCTAA GATTACCGTG
TTGTACGTTG AAGATAACCC CTCCAACAGT GCATTAATGC AAAGTATTGT CGATGACCGT
GAGGACATTC GGCTCGTGCT GGCGGCCGAT GGCGAGCAGG GGCTGGAGCT GGCATTAATT
GAGCATCCCG ATCTGATTTT GATGGATATC AACCTGCCGG GCATGTCGGG GCAGCAAGCG
GCGGCCAAGC TCAAGCAGTG GGTAGATACC GCGTCCATTC CCATCGTGGC GCTATCGGCC
GATGCTACCG CGCCGATGCA GCAGTCGGTG AAGCAATCGG GATTATTTGA TCGCTACTTA
AGCAAACCGC TTGATGTGCT GCAATTAACG CAACTATTCG ATGAATTGAT CGCCCGCCGA
TCGGGTGATG ACACCGCTGC TTGA
 
Protein sequence
MNQKHPKPLL PINETERLQV MRELEFLNDE SNEFYLRKLK IVRRVFDVPI ALIALTDAHF 
QRFKAVLGLD IESIERDLAL CSFAQVPPYG PLVIPDTLQD LRSKESELVT GHLGVRFYAG
VALVLDGQFA VGTLCIMDTR PRSLSADEQI LLKDFALNLT QVLQAKLDAE RNTVLQKQSA
RVGLELNAIL QTAAIGIIRI DKRGVIEAAN PKSLELFGYT EPELIGRNVS MLMPEPWRSA
HDGYLMQFLA TRDAKVIGIG RRVDGERKDG SRFPFNLAVS ELRIDGASQF VGFVSDVSEQ
VEAEHALERE RALLRSVIDS SSNPIAAVNA ANEFILLNTS FARLLAKPVE AVLGQKSELF
LPPQAIKINR ETNARVWASG SSISTRTPIE IAGRMRVFET NKSPLRDERG KQIGVVTIAQ
DVSKLDRITS DLMAMQQLRD MSERFGQSGS WAMDPLTDRV NISAGFARLL GLAPETTHAD
REIIYERVHP DDRAIIDAAF TQTLSEGQSI RFEYRVRDAH GDWRYLRARG NAELAENGQV
TQFVGITQDV TEEVRAQEKM DAQQQLLSGL NKAVQSFLTT VAGDKNVWAQ LLQELLAVTD
AEFGFIGEVL YGIESTPCLK IHAITNLSWS AESDALFERV MAGDMMFCNP DNLIGEVMKS
RAPVIVPELA TDSRRGGFPP GHPLLSNYLG IPLFRGDELV GVLAVANRKA GVGHDLVDFL
TPFTSSCAIL IVSLRQQLER IKFEQALVES KQAADRANKA KSMFLSSMSH ELRTPLNAIL
GFAQLMAASR REPLTEKQNG FVAHILKAGQ HLLTLINDVL NLAKIEAGEM TLSPETLDLG
VILRDALDMV ADNAASTGIA LFNEFNGEHS SPEPLLICAD LTRSRQVLLN ILTNAIKYNR
PRGSGGPYSP DNLGGSVWVR RLPSYQNDAG NWMHGLAIED TGMGIPAAQQ HRLFRPFERL
GQEAGTIEGT GIGLLITRQL IELMQGRIDF ESEEGKGTTF FVWWPAVRED QNDTCGERPD
VKNANEPLAS KHTSSAKITV LYVEDNPSNS ALMQSIVDDR EDIRLVLAAD GEQGLELALI
EHPDLILMDI NLPGMSGQQA AAKLKQWVDT ASIPIVALSA DATAPMQQSV KQSGLFDRYL
SKPLDVLQLT QLFDELIARR SGDDTAA