| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2066 |
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| Symbol | |
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| ID | 8535225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2208018 |
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| End bp | 2211521 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384444 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003263931 |
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| Protein GI | 261856648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.082343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCAAA AACACCCAAA GCCGCTGCTG CCGATCAATG AAACCGAGCG TTTGCAGGTC
ATGCGCGAAC TTGAGTTTCT GAACGATGAA AGCAATGAGT TTTATCTGCG CAAACTCAAA
ATTGTTCGGC GTGTGTTTGA TGTGCCCATC GCGTTAATCG CGTTAACCGA TGCGCATTTT
CAGCGTTTCA AGGCAGTGCT TGGGCTTGAT ATTGAGTCTA TTGAACGCGA TTTGGCGTTG
TGTTCATTCG CACAAGTTCC GCCCTATGGT CCACTCGTAA TACCCGATAC GCTTCAGGAT
CTACGATCCA AAGAATCCGA GCTGGTAACA GGGCATCTGG GGGTGCGTTT CTACGCCGGC
GTGGCGCTTG TTTTAGACGG GCAGTTTGCC GTGGGCACGC TATGCATCAT GGACACGCGG
CCTCGGTCGC TTTCTGCCGA TGAGCAAATC TTGCTCAAAG ATTTTGCGCT CAACTTGACC
CAAGTGCTGC AAGCCAAACT CGATGCCGAG CGAAACACGG TGCTGCAAAA ACAAAGCGCC
CGGGTCGGCT TGGAACTCAA TGCCATTTTA CAAACAGCCG CGATTGGGAT TATTCGCATT
GATAAGCGCG GAGTGATTGA GGCGGCCAAC CCCAAATCTC TTGAGTTGTT TGGTTATACC
GAGCCGGAAT TGATCGGGCG AAATGTGTCC ATGCTCATGC CCGAGCCATG GCGCAGCGCG
CATGATGGGT ATTTGATGCA GTTTTTAGCC ACGCGCGATG CCAAAGTGAT CGGAATTGGC
CGTCGGGTGG ATGGCGAGCG CAAGGATGGG TCGCGTTTTC CATTTAATTT GGCGGTCAGT
GAACTGCGAA TAGATGGCGC AAGTCAGTTT GTGGGGTTTG TGTCGGATGT CAGCGAGCAG
GTAGAAGCCG AGCATGCTTT GGAGCGCGAA CGGGCGTTGC TGCGCTCGGT GATCGATAGT
TCGAGCAATC CTATTGCCGC CGTCAATGCC GCCAATGAGT TCATTCTTCT CAATACATCG
TTTGCTCGCC TTCTTGCCAA ACCCGTCGAA GCCGTGCTGG GACAAAAGTC TGAACTTTTT
TTGCCGCCTC AAGCCATAAA GATTAACCGT GAAACCAATG CACGTGTTTG GGCTTCCGGC
TCATCGATTT CCACGCGAAC GCCGATCGAG ATAGCGGGCC GGATGCGTGT TTTCGAAACC
AATAAATCCC CTTTGCGCGA TGAGCGCGGC AAGCAAATCG GTGTGGTAAC GATTGCTCAG
GATGTCAGTA AACTCGATCG CATCACCTCC GATTTAATGG CGATGCAGCA ATTGCGTGAT
ATGAGCGAGC GCTTTGGTCA AAGCGGATCG TGGGCAATGG ATCCGCTCAC CGATCGGGTG
AACATCAGTG CCGGTTTTGC CCGTTTGCTG GGGTTGGCGC CCGAAACGAC GCATGCGGAT
CGCGAGATTA TTTATGAACG GGTTCACCCC GATGATCGCG CCATTATTGA CGCGGCATTC
ACGCAAACAT TATCTGAGGG GCAATCGATT CGGTTTGAGT ATCGTGTGCG CGATGCCCAT
GGCGACTGGC GTTATCTTCG TGCGCGGGGG AATGCAGAAT TAGCTGAGAA CGGTCAGGTG
ACGCAGTTTG TCGGCATCAC CCAGGATGTA ACCGAAGAAG TTCGTGCCCA AGAAAAAATG
GATGCACAGC AGCAGCTCCT CAGTGGGCTC AACAAGGCCG TGCAGTCTTT TTTAACCACC
GTGGCCGGCG ATAAAAACGT CTGGGCACAA TTGCTTCAAG AGCTGCTTGC CGTTACCGAT
GCCGAATTTG GCTTTATTGG CGAGGTGCTT TACGGCATTG AATCGACGCC GTGTTTGAAA
ATCCACGCCA TTACCAATTT ATCGTGGAGT GCCGAGTCCG ATGCGCTCTT CGAGCGCGTG
ATGGCAGGCG ACATGATGTT CTGCAACCCC GATAACCTCA TCGGCGAGGT TATGAAAAGC
CGTGCGCCGG TGATCGTGCC TGAACTGGCG ACCGATTCGA GGCGCGGTGG TTTCCCGCCG
GGGCACCCGT TGTTGAGCAA CTACCTCGGT ATACCGCTGT TTCGGGGTGA TGAATTGGTG
GGCGTGTTGG CGGTTGCCAA TCGAAAAGCG GGCGTCGGCC ATGATCTGGT GGACTTTTTA
ACCCCTTTTA CCAGCTCCTG CGCCATTTTG ATTGTGAGCC TGCGCCAGCA ATTGGAGCGC
ATTAAATTCG AGCAGGCCCT CGTTGAAAGT AAACAGGCGG CCGATCGCGC GAACAAAGCA
AAATCGATGT TTCTTTCCAG CATGTCGCAT GAGTTGCGCA CGCCGCTCAA TGCCATCCTC
GGTTTTGCCC AGTTGATGGC GGCCAGCCGC CGGGAGCCAT TGACCGAAAA GCAAAATGGA
TTTGTCGCCC ACATTCTCAA GGCGGGTCAG CATTTATTAA CGCTGATCAA CGATGTATTG
AATCTGGCAA AAATCGAAGC CGGCGAGATG ACACTCTCGC CGGAAACGCT GGATTTGGGT
GTCATTTTGC GCGATGCGCT GGATATGGTG GCGGATAACG CCGCCTCGAC CGGCATCGCG
TTGTTCAATG AATTCAATGG TGAGCATAGC TCGCCAGAGC CGTTGTTGAT TTGTGCGGAT
TTAACCCGAT CACGCCAAGT GCTGCTGAAC ATATTGACGA ATGCGATCAA ATATAACCGC
CCAAGAGGCT CGGGCGGCCC GTACAGCCCG GATAACTTGG GGGGCTCGGT TTGGGTGCGC
CGATTACCCA GTTACCAAAA CGATGCGGGT AACTGGATGC ATGGATTGGC GATTGAGGAC
ACGGGCATGG GCATACCGGC CGCGCAGCAA CATCGCCTGT TTCGCCCCTT TGAGCGCTTG
GGCCAAGAGG CTGGCACCAT TGAAGGCACC GGGATTGGCT TGCTCATCAC CCGCCAATTG
ATCGAGTTGA TGCAGGGTCG AATTGATTTT GAAAGTGAAG AAGGCAAAGG CACCACCTTT
TTTGTGTGGT GGCCGGCGGT TCGAGAAGAC CAAAACGACA CCTGCGGCGA GCGGCCCGAT
GTAAAGAACG CGAATGAACC GCTTGCATCC AAACATACGT CGTCGGCTAA GATTACCGTG
TTGTACGTTG AAGATAACCC CTCCAACAGT GCATTAATGC AAAGTATTGT CGATGACCGT
GAGGACATTC GGCTCGTGCT GGCGGCCGAT GGCGAGCAGG GGCTGGAGCT GGCATTAATT
GAGCATCCCG ATCTGATTTT GATGGATATC AACCTGCCGG GCATGTCGGG GCAGCAAGCG
GCGGCCAAGC TCAAGCAGTG GGTAGATACC GCGTCCATTC CCATCGTGGC GCTATCGGCC
GATGCTACCG CGCCGATGCA GCAGTCGGTG AAGCAATCGG GATTATTTGA TCGCTACTTA
AGCAAACCGC TTGATGTGCT GCAATTAACG CAACTATTCG ATGAATTGAT CGCCCGCCGA
TCGGGTGATG ACACCGCTGC TTGA
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| Protein sequence | MNQKHPKPLL PINETERLQV MRELEFLNDE SNEFYLRKLK IVRRVFDVPI ALIALTDAHF
QRFKAVLGLD IESIERDLAL CSFAQVPPYG PLVIPDTLQD LRSKESELVT GHLGVRFYAG
VALVLDGQFA VGTLCIMDTR PRSLSADEQI LLKDFALNLT QVLQAKLDAE RNTVLQKQSA
RVGLELNAIL QTAAIGIIRI DKRGVIEAAN PKSLELFGYT EPELIGRNVS MLMPEPWRSA
HDGYLMQFLA TRDAKVIGIG RRVDGERKDG SRFPFNLAVS ELRIDGASQF VGFVSDVSEQ
VEAEHALERE RALLRSVIDS SSNPIAAVNA ANEFILLNTS FARLLAKPVE AVLGQKSELF
LPPQAIKINR ETNARVWASG SSISTRTPIE IAGRMRVFET NKSPLRDERG KQIGVVTIAQ
DVSKLDRITS DLMAMQQLRD MSERFGQSGS WAMDPLTDRV NISAGFARLL GLAPETTHAD
REIIYERVHP DDRAIIDAAF TQTLSEGQSI RFEYRVRDAH GDWRYLRARG NAELAENGQV
TQFVGITQDV TEEVRAQEKM DAQQQLLSGL NKAVQSFLTT VAGDKNVWAQ LLQELLAVTD
AEFGFIGEVL YGIESTPCLK IHAITNLSWS AESDALFERV MAGDMMFCNP DNLIGEVMKS
RAPVIVPELA TDSRRGGFPP GHPLLSNYLG IPLFRGDELV GVLAVANRKA GVGHDLVDFL
TPFTSSCAIL IVSLRQQLER IKFEQALVES KQAADRANKA KSMFLSSMSH ELRTPLNAIL
GFAQLMAASR REPLTEKQNG FVAHILKAGQ HLLTLINDVL NLAKIEAGEM TLSPETLDLG
VILRDALDMV ADNAASTGIA LFNEFNGEHS SPEPLLICAD LTRSRQVLLN ILTNAIKYNR
PRGSGGPYSP DNLGGSVWVR RLPSYQNDAG NWMHGLAIED TGMGIPAAQQ HRLFRPFERL
GQEAGTIEGT GIGLLITRQL IELMQGRIDF ESEEGKGTTF FVWWPAVRED QNDTCGERPD
VKNANEPLAS KHTSSAKITV LYVEDNPSNS ALMQSIVDDR EDIRLVLAAD GEQGLELALI
EHPDLILMDI NLPGMSGQQA AAKLKQWVDT ASIPIVALSA DATAPMQQSV KQSGLFDRYL
SKPLDVLQLT QLFDELIARR SGDDTAA
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