| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2065 |
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| Symbol | |
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| ID | 8535224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2206117 |
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| End bp | 2207964 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384443 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003263930 |
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| Protein GI | 261856647 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.722895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCCG AAAACACTGC ATCCGAATTC CAAGCAGAGG CGCCCCAGGC ACGCGATGCG
CGCATTTTGA TTGTGGATGA CAATCTTGCC AATCTGGCGG TATTGGCCGA ATTTTTAGAT
ATGGAAGGCT TCTCGCGGGT AACGACCGAG AGCGACCCGC GCCATGCGAT GGTGCTTTGG
CAAGCGCAAC CTTTTGATTT GTTGTTGCTC GATATGCGTA TGCCGCACAT GAATGGGCAT
GAGGTGATGG CAGCGCTCAA GGCCACGCTT GAACCCGATG ATTATCTGCC CTGCATTGTT
TTGACCGCGC AAACGGATCG GGAAACGCGC CAAGCAGCTT TGGCTGCCGG CGCCATTGAT
TTCATTACCA AGCCCTTTGA TTTTGAAGAA ACGTTAAAAC GCATCAACAC AGCCTTAAAT
ACGCGGCTAC TGCACCAGCA AAAGCGCAAT CAGCTCTCCG ATTTTCGTCG TCGTCTTGAC
GAGCAGGCCA ACGAGCTGCA AGAAAAAGAA CACAACCTAG CCTATTTGGC CACTCATGAT
TCGGTAACGG GGTTGCTCAA TCGCCGTGCG CTCACCGAGG GGCTGCGCTC ACACATCATG
GCGCAATCCG ATTCGTTCAG TTGTGCCTTG GTTGAGGTGA CCGATTCCGA TCAATTGCTG
CTGATCGAAG GCGTTGAATC CGTGGATTTT TTTCTGCGAA CCGTGGCATC GCGCCTCAAA
ATGGTTATGG ACGATCATTT TGGAATCTGT GGCGTATGGG GCGGGCAAAC GTTTTTGTGT
GCCTTGCCGT TCGCCGGTGA GGCCGCAGGT CGCGTGTTTA ATCGTCTGGC AAAAGCCGTG
TTTGCACCCG TGGATGATTT TGATGTTGTC GTCACGCTGC ACGGACGGGG CGGGTATTCT
GGCGTTCGGC CAAAAGAATT GGATACGCCT GAGGCCATTG ATGCCACCGT GCGCCGGGCG
GGTTTTGCTC TGGCCAGCCA GCATAAACGA AGCAATCTCG TGGTCGAGTT TAACCAGATT
ATGGAAGACA CCGCGCTGCG GCGCAGCTTG CTTGAGCGCG AACTGATGTC GGCAATGAGT
GAGCACCCCG AGCAGTTCTT TCTGCAATTT CAACCTAAAG TGGAGTTGAC CCGCGAGACC
ATCGTGGGTG GTGAGGCATT GCTTCGCTGG CAGCACCCGG AACTCGGCTT CATTTCACCC
GCCGAGTTTA TTCCGATCGC CGAAGAGAAG GGCCAGATCG AGGTGCTTGG CTTGATTGTG
ATCGAGCACG CCTTGCAGTT CGTGCGCCGG ATGCAATCGG AACTGGGGCG TGCGGTGCCC
ATTGCAGTCA ATGTATCGGG TGTTCAACTG GAGTTGATGC GCGCCAAGGG GCAAAGCCTC
GTCGATGAAG TCCAGCGCCT GTTGACTGCA TATGCGGTTG CACCGCCGTT GCTGGAACTG
GAAATTACCG AGTCGGCATT GATGATCGGG TTCGATTGGG TCGTCGATGC GCTGCATCAG
TTGCGCGAGT TGGATGTTTC GGTGGCCTTG GATGATTTCG GCACCGGCTA TTCCTCATTT
GCGTACATCC AGACCCTGCC GATTTCCACG CTGAAAATCG ACCGTGCTTT CGTCGATAAT
GCCGCAAACA GTCCGCGCCA AGCAGCTTTG CTGGGCGCCA TTGTGCGCAT GGCGCAGGAT
CTTGGCCTGA CGACAGTAGC CGAGGGCGTA GAAACGCGGG AGGACATCGA TCTTCTAAAG
CAACTTAATT GCCCGATCGC CCAAGGTTAT TATTACAGCC GCCCACTCAT GCCCGATGAT
TTCATTACAT TGCTTCGGCA ACCGAGTTGC GCACGCGCCA TGCCATAA
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| Protein sequence | MSAENTASEF QAEAPQARDA RILIVDDNLA NLAVLAEFLD MEGFSRVTTE SDPRHAMVLW
QAQPFDLLLL DMRMPHMNGH EVMAALKATL EPDDYLPCIV LTAQTDRETR QAALAAGAID
FITKPFDFEE TLKRINTALN TRLLHQQKRN QLSDFRRRLD EQANELQEKE HNLAYLATHD
SVTGLLNRRA LTEGLRSHIM AQSDSFSCAL VEVTDSDQLL LIEGVESVDF FLRTVASRLK
MVMDDHFGIC GVWGGQTFLC ALPFAGEAAG RVFNRLAKAV FAPVDDFDVV VTLHGRGGYS
GVRPKELDTP EAIDATVRRA GFALASQHKR SNLVVEFNQI MEDTALRRSL LERELMSAMS
EHPEQFFLQF QPKVELTRET IVGGEALLRW QHPELGFISP AEFIPIAEEK GQIEVLGLIV
IEHALQFVRR MQSELGRAVP IAVNVSGVQL ELMRAKGQSL VDEVQRLLTA YAVAPPLLEL
EITESALMIG FDWVVDALHQ LRELDVSVAL DDFGTGYSSF AYIQTLPIST LKIDRAFVDN
AANSPRQAAL LGAIVRMAQD LGLTTVAEGV ETREDIDLLK QLNCPIAQGY YYSRPLMPDD
FITLLRQPSC ARAMP
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