| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2056 |
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| Symbol | |
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| ID | 8535215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2199465 |
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| End bp | 2200007 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384436 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003263923 |
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| Protein GI | 261856640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.939172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATTG CGTTCAACAA ACCTTTCGAT GTTCTCTCGC AGTTCACAGT GGAACCCGGT
TCTGCGGCGG GCACATTGGC CGATTATATT GATCAGCCAA ATGTGTATGC GGCTGGGCGG
TTGGATCGGG ACAGTGAAGG CTTGTTGCTT TTGACCGATG ATGGGCGTTT GCAGGCGCAG
CTCACGCAAC CCGATGCCAA ACAACCCAAA ACCTATCTGG CGCAGGTCGA TGGCGACGTC
ACAGCGCAAG CACTGGCCCA ATTACGGGCT GGTGTGGTGC TCAAAGACGG CAAAACCCGT
CCCGCCGAGG CGCATGTCGT GCCCGAACCC GACTGGCTGT GGCCGAGAAC GCCGCCCATT
CGCGTGCGAA AAAACATCCC GACAAGCTGG ATCGAATTGA CAATTACCGA AGGCAAAAAC
CGCCAAGTAC GCCGGATGAC AGCAGCGGTC GGTTTCCCGA CGCTTCGCCT GATCCGCGTT
GCGGTCGGTA GTCACAATCT AGGTTCATTG CAGCCTGGTC AATGGCTTTT GATCGAGCCT
TGA
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| Protein sequence | MLIAFNKPFD VLSQFTVEPG SAAGTLADYI DQPNVYAAGR LDRDSEGLLL LTDDGRLQAQ
LTQPDAKQPK TYLAQVDGDV TAQALAQLRA GVVLKDGKTR PAEAHVVPEP DWLWPRTPPI
RVRKNIPTSW IELTITEGKN RQVRRMTAAV GFPTLRLIRV AVGSHNLGSL QPGQWLLIEP
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