| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2038 |
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| Symbol | |
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| ID | 8535197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2181947 |
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| End bp | 2182882 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646384419 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003263906 |
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| Protein GI | 261856623 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.487981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGCGC CAACCCACCA TGTAATTCAT GAGCATGTTT TGCATGATGA TACGGCACGG
CTGATCGACG AATTCATCAA CGCGCTCTGG CTGGAAGAGG GTTTGAGCAA AAATACGCAG
AGCGCCTACC GTTCCGATTT GCGTCTGGCC GCACTGGACT GGCAGCGTGC CGGTTTGCGG
CTAAACGAAG TCTCGGCAGA GGATTTGCCC CGGCTGCTTG GCGAGCGGAT GAGTTCCGGG
CAATCGGCAC GATCAATCGC GCGTTTGCGC TCATCCTTGA AGCGGTTTTT CGGCTGGTTG
CGCCAGCAGA ATCTACGCAC GGATGATCCG ACCACCGCCC TGGCAGCGCC CCGTTTGCCG
CGTGCATTGC CCTACGCGCT TTCGGAAAAT GAGGTTGAGC GCCTGCTTGC CGCGCCCGAT
GTGTCCGAGC CCATCGGGCT TCGGGATCGG GCGATGCTGG AGTTGCTGTA TGCCAGTGGC
CTGCGTGTGA CGGAACTCAT CGGCCTGCAA TTTGGTCAGA TTAACCTCGT GCAGGGCGTG
TTGCGTATAA CGGGTAAAGG CAACAAGGAT CGATTGGTGC CCATCGGCGA TGAGGCGATC
GTCTGGTTGA GTCGTTATCT TCGCGAGGCG CGGTCAGGGT TGCTGGGGCG GCGTGAGTCC
GCGAACGTAT TCGTCACCGA GCGCGGCGAT GGCATGACGC GTCAGGCGTT CTGGTACCGC
ATCAAGCACC ACGCCCTAGC GGCTGGCTTG GCGCGGCTGC CTTCGCCGCA TACCCTGCGT
CATGCCTTTG CGACTCACTT GCTGAACCAC GGGGCTGATT TGCGGGTATT GCAGATGCTG
TTGGGGCATG CGGATCTATC GACCACGCAG ATTTATACCC ACGTGGCGAC CACGCGTCTG
AAAGCATTGC ACGCACAGCA TCATCCCCGT GGATAA
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| Protein sequence | MSAPTHHVIH EHVLHDDTAR LIDEFINALW LEEGLSKNTQ SAYRSDLRLA ALDWQRAGLR
LNEVSAEDLP RLLGERMSSG QSARSIARLR SSLKRFFGWL RQQNLRTDDP TTALAAPRLP
RALPYALSEN EVERLLAAPD VSEPIGLRDR AMLELLYASG LRVTELIGLQ FGQINLVQGV
LRITGKGNKD RLVPIGDEAI VWLSRYLREA RSGLLGRRES ANVFVTERGD GMTRQAFWYR
IKHHALAAGL ARLPSPHTLR HAFATHLLNH GADLRVLQML LGHADLSTTQ IYTHVATTRL
KALHAQHHPR G
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