| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2036 |
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| Symbol | |
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| ID | 8535195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2179768 |
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| End bp | 2181069 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384417 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | YP_003263904 |
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| Protein GI | 261856621 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.70971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAAC GCGACGACAC CCGCCCCAAG CTGCAAAACT CACCCAGAAA AGTCCTGTTT
GCCAGCCTGA TCGGCACCAC CATCGAGTTT TTCGACTTTT ATATCTACGC CACTGCCGCC
GCTTTGGTGT TTCCAAAATT ATTCTTCCCT GAATCGGACC CAACGACGGC CGTCCTACAA
TCACTGGCAA CGTTTGCCAT TGCCTTCTTT GCCCGACCGG TCGGCGCTGC CCTGTTCGGG
CACTTCGGTG ATCGCGTCGG CCGTAAAGCC ACCCTGGTCG CCGCTCTGCT GACGATGGGG
CTATCGACCG TGGCGATCGG CCTGCTCCCG ACCTACGACA GCATTGGCGT CGTCGCCCCT
ACCCTACTTG CACTGTTTCG CTTCGGCCAG GGCTTGGGGC TGGGCGGCGA ATGGGGTGGC
GCGATCCTGC TGGCGACCGA AAACGCCCCG CCGGGAAAAC GCGCCTGGTA CGGCATGTTC
CCTCAATTGG GCGCGCCGAT TGGCTTCATT CTTTCCAGCG GCATCTTTCT GTTGCTGACC
GCGTTTCTGA CCGACCAACA ATTTTTCGAC TTCGGTTGGC GCATCCCTTT TCTTGCCAGC
GCGGCACTGG TGATCGTGGG GTTGTACGTA CGACTGAAAA TCACCGAAAC TCCTGCCTTT
CAGGAAGTGG TTGAACACAA CACACGGGTC AAAACACCGA TTGCCACGGT GTTTAAAAGC
CACTGGAAGC CCTTGATTGC AGGCACGGTC ATTGCCTTGG CGACATTTGT GACCTTCTAC
CTGATGACTG TGTTTGCACT GACCTACGGC ACGGCGAAAA ACGGTTTGGG CTACAGTCGT
GAAACCTTCC TGTTCGCCCA ACTGTTTGCG GTCTTGTTTT TTGCGATCAC CATTCCCGTT
TCCAGCCTGA TTGCGGATCG ATTCGGTCGG CGTTTGACGC TGATCGTGAT CACAATCGCG
ATCTTTTTGT TCGGCTTTGC GCTGGCCCCA CTGTTCGGTT CCGGCAATCT GACGGGCGTT
GTGGTGTTTC TGGTGCTTGG ACTGGGACTG ATGGGGCTGA CCTACGGTCC GCTCGGCACA
CTTCTCTCTG AGCTGTTTCC GACAGCCGTG CGCTACACCG GCACATCAAT GGCGTTCAAC
CTGTCCGGGA TTTTCGGCGC CTCGCTCGCA CCTTATGCGG CCACGTGGCT TGCCAGCCAC
TATGGGCTTA ACTATGTGGG CTATTATCTC TCGGCCGCTG CCGCACTGAC CTTGCTCGGC
CTGCTCTCCA TCAAGGAGAC CAAGGATAAA ACATTCCACT GA
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| Protein sequence | MDERDDTRPK LQNSPRKVLF ASLIGTTIEF FDFYIYATAA ALVFPKLFFP ESDPTTAVLQ
SLATFAIAFF ARPVGAALFG HFGDRVGRKA TLVAALLTMG LSTVAIGLLP TYDSIGVVAP
TLLALFRFGQ GLGLGGEWGG AILLATENAP PGKRAWYGMF PQLGAPIGFI LSSGIFLLLT
AFLTDQQFFD FGWRIPFLAS AALVIVGLYV RLKITETPAF QEVVEHNTRV KTPIATVFKS
HWKPLIAGTV IALATFVTFY LMTVFALTYG TAKNGLGYSR ETFLFAQLFA VLFFAITIPV
SSLIADRFGR RLTLIVITIA IFLFGFALAP LFGSGNLTGV VVFLVLGLGL MGLTYGPLGT
LLSELFPTAV RYTGTSMAFN LSGIFGASLA PYAATWLASH YGLNYVGYYL SAAAALTLLG
LLSIKETKDK TFH
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