| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2035 |
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| Symbol | |
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| ID | 8535194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2178858 |
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| End bp | 2179679 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384416 |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_003263903 |
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| Protein GI | 261856620 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.349753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCCC AAGCCCCTTG GTATCAAGTA TTCCTCAGTC AAAAACTCTA CAGCGGCATT
CTTCTGGCCG CTGCCATCGG CCTGACGAGC GGTTGCTCGT GGTTCTCAAA GAATTCCGAT
CAGGATCAGG CCGAACTCGC CGACCCGACG GTTTCTGCAG CCCAGCTTTA CGATGAAGCC
TCCAGCGCCA TGCGCAGGGA TGACTACGGC ACAGCCATCA AGAAATTCGA AACCTTGGAA
GGGCGCTACC CGTTTGGTGC CTACACCGAA CAGGCGCAAC TGGAAGTGGC CTACGCCTAC
TACAAATACA ACGAGCCAGA TTCTGCTATC GCGGCGGCCG ATCGCTACAT CCAGATTCAC
CCGCAGGGTA AAAACGTCGA TTACGCGCTC TATATCAAAG GTCTGTCCAA CATGGATCGC
GGCGACTCTC TGATCAACAA GATCGCCAAA CCAAACCTCG CTTATCGCGA TCAAAGCATC
CTGCACAACG CGTATGCGGC TTTTTCCGAG CTCGTCACTC GTTTCCCGGA CAGCAAGTAT
GTCGATGATG CCAGTGTCCG CTTGATCAAG ATTCGCAACG ATCTGGCCGA ACATGAAATC
TACGTAGCGC GGTATTACAT GAAACGCGGC GCTTGGTTAG CCGCAGCCAA TCGCGCGCAA
ACCGCACTCA GCAAGTACAA CGGCTCAACC TCAACCATCC CCGCGTTGGA AATCCTGATT
TCCGCATACA AGAAGTTGGG GCTCAAAACA GAAGCTGCCG ATGCGGAGCA AATTCTCAAA
GCGACCCGCG CTGCCAACAA GATTCCTGCG CCCAAGGCCT GA
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| Protein sequence | MSAQAPWYQV FLSQKLYSGI LLAAAIGLTS GCSWFSKNSD QDQAELADPT VSAAQLYDEA
SSAMRRDDYG TAIKKFETLE GRYPFGAYTE QAQLEVAYAY YKYNEPDSAI AAADRYIQIH
PQGKNVDYAL YIKGLSNMDR GDSLINKIAK PNLAYRDQSI LHNAYAAFSE LVTRFPDSKY
VDDASVRLIK IRNDLAEHEI YVARYYMKRG AWLAAANRAQ TALSKYNGST STIPALEILI
SAYKKLGLKT EAADAEQILK ATRAANKIPA PKA
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