Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2033 |
Symbol | |
ID | 8535192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2176882 |
End bp | 2177646 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646384414 |
Product | protein of unknown function DUF152 |
Protein accession | YP_003263901 |
Protein GI | 261856618 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0223194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGCGTC TGGTGGAAAT CATCAAGGCT GACTGGACGC CCCCACCCGG CGTTCATGCC TGTGTAACCA CCCGTTCCGG TGGCGTGAGC CATCCGCCGT TCGATCATCT CAATCTGGCG ACCCATGTGG AAGATGACCC CGTGGCGGTC GCCGAGAATC GTGCCCGGTT GTGTGTGTCG CTCGCCTTGC CTTCCGAACC AATGTGGTTG AATCAGGTGC ACGGCGTGGC TGTGGCGGAT GAACGCAGCG CAACTTCCTG TTCTGGCGAT TGCGCCACAG CCGATGCGGC TTATACCGAT CAACCCGGCG TGGTATTAAG TGTGCTCACG GCCGATTGCC TTTCGGTGAC CTTTGCCAGC CTAGACGGGA TTGAGCTGGC CGTGGCTCAT GCTGGTTGGC GCGGCTTGGC TGCCGGTGTT TTGGAATCGA CCTTGGCCCG ATTCAGGGCA TCGCCCGAAT CGATTCAGGC ATGGATCGGG CCGGCCATCG GGCCGGAAAG TTTCGAGGTG GGCGAAGAAG TACGTTCGGC ATTCATGGCT GTTTTACCGG AAGCGCAAAC CGCATTTGTA CCTACGGGCG AAGCTGGAAA ATATTTGGCT GATCTGCCCG CATTGGCACG GCAACGGCTG AGGCGCGCTG GTTTGAAGCG GATTAGCGGC GGTAATTTAT GTACCGTGCG TTCGCCGGAT CTGTTTTATT CTTACCGACG TGATGGCGGC CGGACGGGGC GCATGGCGAC GCTGATTTGG CGTGATGCCC ATTGA
|
Protein sequence | MGRLVEIIKA DWTPPPGVHA CVTTRSGGVS HPPFDHLNLA THVEDDPVAV AENRARLCVS LALPSEPMWL NQVHGVAVAD ERSATSCSGD CATADAAYTD QPGVVLSVLT ADCLSVTFAS LDGIELAVAH AGWRGLAAGV LESTLARFRA SPESIQAWIG PAIGPESFEV GEEVRSAFMA VLPEAQTAFV PTGEAGKYLA DLPALARQRL RRAGLKRISG GNLCTVRSPD LFYSYRRDGG RTGRMATLIW RDAH
|
| |