Gene Hneap_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2019 
Symbol 
ID8535178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2164317 
End bp2165879 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content60% 
IMG OID646384401 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_003263888 
Protein GI261856605 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000259128 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGC AGCCGCCTTT GCCACTTTAT ACGTCTGAGC AAATCCGCGC GCTGGAGCAG 
GCGGTATTTG ATGGTGGCGA AACGGCTGAG CAGTTGATGG CGCGTGCAGG TGCGGCGTTG
TTTTCGGTAA TGCAAACGAC ATGGCCGGAT GCCCGAAGGG TCGGTGTGCT GCTGGGCTCT
GGTCAAAATG CGGGCGATGG CCTCGTTCTG GCGCGCTTGG CGCGAGCCGA AGGGTTTCGC
GTTACTTTGT TTGGGTGGTG TCGGCCGGAG CAGTTGCACG GTGCGGCGCA TCGAGCTTGG
CTGGAATTGA AAACCGCGTG CTCCGATGTC GTCGTCATTC ATGAGTGGGG CAAGGTCGTC
GCTCAGGATG ACTTTGATGT GATTGTCGAT GCCGGTTTTG GGATTGGTTT GTCGCCCTCT
CGTCCGCTCA ATGCCGAGGC TACAGGTTGG ATCGAGTACG TCTACGCATC CCGTCACGAC
GGCGCCGCTG TACTGGCTGC CGATCTGCCT TCGGGCTTGA TTGCTGATAC CGGCTCGGCC
GGCCCTGTGG TTCAAGCCGA TGTCACCGTT TGTTTTCTTG CGATGAAGAT CGGCTTGGTC
ACCGGTCGTG GTCCTGCGGT GAGTGGCCGC ATCGTGTTGG CCAATTTAGG TATTCCACCC
AGGAAGGATC CGCCTAAGAA GCAAACGCCA GATGTTCAGC TTGTGTTGGG CGCGGAATCG
TTTCCGCCTA AGCCGCGCGA TGGTCACAAG GGGCGATTCG GAACCGTACT GATTGTGGCG
GGTAATCGCG GCATGATGGG CGCCGCACGT ATGGCGGCCG AAGCAGCGCT AAGGATCGGG
GCAGGCAAAG TGATTGTGGC GACGCACCCC GAACACGCGG CTACATTGGC GATTGGTCGT
CCTGAGTTGA TTGTGCACGG CCTCGACGCG GCAACCTTGC TGGATGAGCT TCTGGCGCAA
GCCGATGCCA TTGTGCTCGG GCCGGGGTTG GGGCGCGATG ACTGGGCCAA GCAGATGGCT
GCTCGTGTTC TGTCAACTCA ATTGCCTTTG ATAATTGATG CCGATGGACT GGGTTTTCTG
CCGCCAAGCG CGGCTATGAA TTCATTGAGA ATAATGACAC CGCATCCCGG CGAAGCGGCG
CGTTTGCTCG GCTGCACGGT AGCCGAGATC GAGCAGGATC GGTTGGCGGC GGCGCGAGCG
CTACGCGATC GTTTCGGTAT GCTGGGTGTG CTCAAAGGTG CGGGCAGCGT GCTCTTCTTG
CCCGATGAAC TGCGCGTGTG TGGTCGAGGC AGTCCCGCTC TGGCAACGGC TGGAAGCGGT
GATGTCCTCG CCGGTATGAT CGGTGGTTTG CTGGCGTTGG GTATTGTTCC ATCGGAAGCG
CTGCCCCGTG CCGTGTGTTG GCATGCCCTA GCCGGGGAGC TATTGGCCGA GCAATCGGGT
GCCTGGGGTG CCGTGGCATC CGATCTGTTC GAGCCGATCC GCGCTGTTGT AAATGGTCGG
GCAAACGGTC TGGCCAATGA TCGGGTGACA CTGCCACCTG CGAACGTGTC GTTGTGGCGA
TGA
 
Protein sequence
MKMQPPLPLY TSEQIRALEQ AVFDGGETAE QLMARAGAAL FSVMQTTWPD ARRVGVLLGS 
GQNAGDGLVL ARLARAEGFR VTLFGWCRPE QLHGAAHRAW LELKTACSDV VVIHEWGKVV
AQDDFDVIVD AGFGIGLSPS RPLNAEATGW IEYVYASRHD GAAVLAADLP SGLIADTGSA
GPVVQADVTV CFLAMKIGLV TGRGPAVSGR IVLANLGIPP RKDPPKKQTP DVQLVLGAES
FPPKPRDGHK GRFGTVLIVA GNRGMMGAAR MAAEAALRIG AGKVIVATHP EHAATLAIGR
PELIVHGLDA ATLLDELLAQ ADAIVLGPGL GRDDWAKQMA ARVLSTQLPL IIDADGLGFL
PPSAAMNSLR IMTPHPGEAA RLLGCTVAEI EQDRLAAARA LRDRFGMLGV LKGAGSVLFL
PDELRVCGRG SPALATAGSG DVLAGMIGGL LALGIVPSEA LPRAVCWHAL AGELLAEQSG
AWGAVASDLF EPIRAVVNGR ANGLANDRVT LPPANVSLWR