Gene Hneap_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2011 
Symbol 
ID8535170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2155838 
End bp2156974 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content57% 
IMG OID646384393 
ProductHflK protein 
Protein accessionYP_003263880 
Protein GI261856597 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGGA ATGAACCTGG CGGCAGCGGC AAGGACAATG ATCCTTGGTC CAATCCGCGC 
CGCAGCGGCA AACCGCCCAA TATCGACGAA GCAATCGAGC GCCTGCAGAA AAAATTCGGT
GGCGCGATGG GGGGTGCCGG CGGCGGCAAG GGTATCGCAG TTGTTGCGGT ACTGCTGATC
GTCGTCTGGC TGCTTTCCGG GATCTACATC ATTGATGCCG GACAGCGCGG TGTAGAGCTT
CAGTTCGGTA AATACACCGA TACCACACGC GCGGGGCCGC ACTGGCATCT GCCGTATCCC
ATCGGTACGG TGGTCAAGGT CAATGTTGAT GAATTGCGCG ACAAGCAGCT CAAGATGACC
TCGCTGACTA ACGATGAGAA TATCGTGGAA GTCAGGATTG GTAGCCAGTT TCTGGTCACC
GACCCGGTTA AGTACCTGTT CAATGTGCGT GACCCGGACG GTACGCTCTC CGATGTCATG
CAAAGCGCGA TTCGTGAAGT CATCGGCTCC AAGAAGATGG ATAACGTGCT GACCGAGGGC
CGTGCCGAAA TTGTCAGTCT GGTGCGTGAT CGCATGCAGA ATCTGCTCGA TGGCTATGAT
ACCGGCCTGA AGGTTCAGTC CGTCAACTTG CAGGACATCC AGCCACCGGA AGCCGTTCAG
CCCGCCTTCG AAGACGCTAT TCGTGCGCGT GAAGATGAAC AGCGCTACAT CAGTGAAGCC
TCGGCCTACG CCAACAAGGT CGTGCCGCGT GCGCGGGGTG CTGCGGCACA GATTCTCGAG
CAGGCCAAAG GATACGAATC CAAGGTGACG AATGAAGCGC TGGGCGATGC CTCCCGTTTC
GAACAACTGC TCAAGTCCTA CAAGCTGGCG CCGGATATTG CGCGCGAACG CATGTATCTG
GATGCCGTTT CAGGCGTGCT GTCCAAGAAC AAGAGCATCG TGGTTGACTC CGGTTCGGGC
AATAACGTGT TCTATTTGCC GTTAGGCTCG AATGATGCGC GTGCGCCGTC AGGCAAGGCT
ATTGATATCG ACAGCCTACC ATTGCCAAGC CTGCCCAGCC AGGCGGATAA CGGGAACTCA
AGAGGGAGCC TCACTAGCGA TGACCGAGGT GATCTGCGTT CGAGGAATGC GCCATGA
 
Protein sequence
MAWNEPGGSG KDNDPWSNPR RSGKPPNIDE AIERLQKKFG GAMGGAGGGK GIAVVAVLLI 
VVWLLSGIYI IDAGQRGVEL QFGKYTDTTR AGPHWHLPYP IGTVVKVNVD ELRDKQLKMT
SLTNDENIVE VRIGSQFLVT DPVKYLFNVR DPDGTLSDVM QSAIREVIGS KKMDNVLTEG
RAEIVSLVRD RMQNLLDGYD TGLKVQSVNL QDIQPPEAVQ PAFEDAIRAR EDEQRYISEA
SAYANKVVPR ARGAAAQILE QAKGYESKVT NEALGDASRF EQLLKSYKLA PDIARERMYL
DAVSGVLSKN KSIVVDSGSG NNVFYLPLGS NDARAPSGKA IDIDSLPLPS LPSQADNGNS
RGSLTSDDRG DLRSRNAP