Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2010 |
Symbol | |
ID | 8535169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2154960 |
End bp | 2155841 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646384392 |
Product | HflC protein |
Protein accession | YP_003263879 |
Protein GI | 261856596 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0721507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAA TTAACCGTGT CGTTCTGCCG ATCGTGGTGA TCGGTGTGTT CTTATTCGCT ACAGCCACCT TCGAGGTCAA GCAGTATCAG TCGGCGCTGG AGTTCCGTCT GGGTGAAATT GTTCAGGACA AATTCGATCC TGGGTTGCAC TTCAAGTTGC CGTTCATCAA CACCGTCAAG TTGTTCGACC GCCGCGTACT TACGATGACT TCACAGCCGG AACGGTTTTT GACCAGCGAG AAGAAAAACC TGATCATCGA CTACTACATC AAGTGGCAAA TCATGAACGC GGCTGATTTC TATCGCTCGA CGCGTGGCGA CGAACGAATC GCCATGAACC GGATGGACCA GATCGTTCGT GACGCCATGA AAAGCCAGAT TTCCAGCCTC ACGGTGAACG AAGTGGTATC GGGTGATCGC GATCTGTTCA TGAAGACCGT GATTGATACG ACCAACCGCG ACATCAAGGG CTTGGGTGTG AAGATCAGCG ATGTGCGCAT CATGCAGATC GAATTGCCCA AAGAGGTGCG CCAATCTGTC TATGCTCGGA TGGAGAAAGA GCGTTCCGCT GTCGCCCAGT CCATCCGCTC GCGCGGTGAG GAGCAGGCCA AGAAGATTAC TTCGGCGGCC GATCGTGAAC GTGTGGTCAT CCTCGCCGAG GCGGATCGTC AGGCCGCAGA AATCCGAGGT GCCGGCGATG CGGCCGCAGC CGCGACTTAT GCCAAGGCTT ACGGCCAAGA TCCGAAGTTC TTTGAATTCG ATCGGAGTTT ACAAGCCTAC AAGAAGGCTT TCGATCAAGG CGGGGATACT TTCGTACTGA ATCCTGATAG CCCGTTCTTC AAGTATTTCC GTGATTCGCA AGAGTCGAAC GTAAAACACT GA
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Protein sequence | MNIINRVVLP IVVIGVFLFA TATFEVKQYQ SALEFRLGEI VQDKFDPGLH FKLPFINTVK LFDRRVLTMT SQPERFLTSE KKNLIIDYYI KWQIMNAADF YRSTRGDERI AMNRMDQIVR DAMKSQISSL TVNEVVSGDR DLFMKTVIDT TNRDIKGLGV KISDVRIMQI ELPKEVRQSV YARMEKERSA VAQSIRSRGE EQAKKITSAA DRERVVILAE ADRQAAEIRG AGDAAAAATY AKAYGQDPKF FEFDRSLQAY KKAFDQGGDT FVLNPDSPFF KYFRDSQESN VKH
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