Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2008 |
Symbol | |
ID | 8535167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2153392 |
End bp | 2154591 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646384390 |
Product | tRNA synthetase class II (G H P and S) |
Protein accession | YP_003263877 |
Protein GI | 261856594 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00513827 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACATA AACTCTCTCG CTGGGCCTTG CCGGCGGGTA TCGATGAGTT GCTGCCAGAG CAGGCGCGGC GGGTAGAACA GCTGCGCACC GCCTTGCTGC ATCAGTTCCA CGTGGCGGGA TACGATCTCG TGATTCCCCC ATTGGTCGAA TTCGTGGATT CGTTGCTCGT GGGCTCAGGC CGGGATTTGG CGCTGGATAC CTTGCAGATG ACTGATGGCC TGACCGGTCG ACAGCTCGGT CTTCGCGCCG ACATGACGCC TCAGATTGCT CGAATTGATG CGCATAGCAT GAAGCCTGAG GCGGAGCGTC GACTCTGCTA CCTCGGGACT GTCGTTCGTG CGCGGCCGGA TGGATTGGGT GGCAGTCGCA CGCCCATGCA GGTTGGCGCC GAATTATACG GCGTGGCGGA AGTCGAGGGT GATCTTGAAA TCATCAGCTT GATGCTCTCT CAGCTAAAGC AAGCAGGTGT GGATCGGATC GTTCTCGATC TCGGTCATGT GGATGTATTC GGTGAACTGG CCGTGGCGGC TGGCTTCGAT GATGAAGATG AAGATATCGC ACGTGATGCC TTGCAGCGCA AATCCACGGC AGATATTCAG TCCCTGCTGG CGGCACGGCA GATTGCACCG CCGCTCGCAA ACGCTTTGAC TTTGTTGACT CAGCTCAATG GCGAATGGTC GGCGGTGCTT GCCAAGGCAA ACGTGGTGCT GGCCGATGTG ATGACACCCG GTATGCAGAG CGCGCTCGAC CGCCTGGCAA TTATCGGTTC TGCCATTGAG CGAAACTTCT CCCAGGTCGA CGTGTTGATC GACCTGTCGG AGTTGCACGG TTACCACTAC CAGACCGGGC TGGTGTTTGC GGCGTATGCA CCCGGCTTGG GGCGAGAGAT TGCTCGCGGT GGACGATACG ATGATATTGG AGAGGCTTTT GGCTCTGCTC GACCAGCGAC CGGATTCTCC CTCGATATGC GTGAATTGCT GCGCTTTTTT GACGGATCTG GCGTCAAAGA CCCCGTTATT TATGCGCCAG CCGATTATGC CGATGCTGCC TTGATTGCTG CCGTCGAGCG ATTGCGTGCG ACCGGACGAC GAGTCGTGAT GACTACGCAG CCAGTACCAG CCGGTGCGCC ACATTTGGTT CGGCAGAGCG ATAGCACAAA AGATTTATGG CATTTAATGG GTGATACCAA TCATGGGTAA
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Protein sequence | MSHKLSRWAL PAGIDELLPE QARRVEQLRT ALLHQFHVAG YDLVIPPLVE FVDSLLVGSG RDLALDTLQM TDGLTGRQLG LRADMTPQIA RIDAHSMKPE AERRLCYLGT VVRARPDGLG GSRTPMQVGA ELYGVAEVEG DLEIISLMLS QLKQAGVDRI VLDLGHVDVF GELAVAAGFD DEDEDIARDA LQRKSTADIQ SLLAARQIAP PLANALTLLT QLNGEWSAVL AKANVVLADV MTPGMQSALD RLAIIGSAIE RNFSQVDVLI DLSELHGYHY QTGLVFAAYA PGLGREIARG GRYDDIGEAF GSARPATGFS LDMRELLRFF DGSGVKDPVI YAPADYADAA LIAAVERLRA TGRRVVMTTQ PVPAGAPHLV RQSDSTKDLW HLMGDTNHG
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