| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2008 |
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| Symbol | |
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| ID | 8535167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2153392 |
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| End bp | 2154591 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384390 |
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| Product | tRNA synthetase class II (G H P and S) |
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| Protein accession | YP_003263877 |
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| Protein GI | 261856594 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
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| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00513827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACATA AACTCTCTCG CTGGGCCTTG CCGGCGGGTA TCGATGAGTT GCTGCCAGAG
CAGGCGCGGC GGGTAGAACA GCTGCGCACC GCCTTGCTGC ATCAGTTCCA CGTGGCGGGA
TACGATCTCG TGATTCCCCC ATTGGTCGAA TTCGTGGATT CGTTGCTCGT GGGCTCAGGC
CGGGATTTGG CGCTGGATAC CTTGCAGATG ACTGATGGCC TGACCGGTCG ACAGCTCGGT
CTTCGCGCCG ACATGACGCC TCAGATTGCT CGAATTGATG CGCATAGCAT GAAGCCTGAG
GCGGAGCGTC GACTCTGCTA CCTCGGGACT GTCGTTCGTG CGCGGCCGGA TGGATTGGGT
GGCAGTCGCA CGCCCATGCA GGTTGGCGCC GAATTATACG GCGTGGCGGA AGTCGAGGGT
GATCTTGAAA TCATCAGCTT GATGCTCTCT CAGCTAAAGC AAGCAGGTGT GGATCGGATC
GTTCTCGATC TCGGTCATGT GGATGTATTC GGTGAACTGG CCGTGGCGGC TGGCTTCGAT
GATGAAGATG AAGATATCGC ACGTGATGCC TTGCAGCGCA AATCCACGGC AGATATTCAG
TCCCTGCTGG CGGCACGGCA GATTGCACCG CCGCTCGCAA ACGCTTTGAC TTTGTTGACT
CAGCTCAATG GCGAATGGTC GGCGGTGCTT GCCAAGGCAA ACGTGGTGCT GGCCGATGTG
ATGACACCCG GTATGCAGAG CGCGCTCGAC CGCCTGGCAA TTATCGGTTC TGCCATTGAG
CGAAACTTCT CCCAGGTCGA CGTGTTGATC GACCTGTCGG AGTTGCACGG TTACCACTAC
CAGACCGGGC TGGTGTTTGC GGCGTATGCA CCCGGCTTGG GGCGAGAGAT TGCTCGCGGT
GGACGATACG ATGATATTGG AGAGGCTTTT GGCTCTGCTC GACCAGCGAC CGGATTCTCC
CTCGATATGC GTGAATTGCT GCGCTTTTTT GACGGATCTG GCGTCAAAGA CCCCGTTATT
TATGCGCCAG CCGATTATGC CGATGCTGCC TTGATTGCTG CCGTCGAGCG ATTGCGTGCG
ACCGGACGAC GAGTCGTGAT GACTACGCAG CCAGTACCAG CCGGTGCGCC ACATTTGGTT
CGGCAGAGCG ATAGCACAAA AGATTTATGG CATTTAATGG GTGATACCAA TCATGGGTAA
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| Protein sequence | MSHKLSRWAL PAGIDELLPE QARRVEQLRT ALLHQFHVAG YDLVIPPLVE FVDSLLVGSG
RDLALDTLQM TDGLTGRQLG LRADMTPQIA RIDAHSMKPE AERRLCYLGT VVRARPDGLG
GSRTPMQVGA ELYGVAEVEG DLEIISLMLS QLKQAGVDRI VLDLGHVDVF GELAVAAGFD
DEDEDIARDA LQRKSTADIQ SLLAARQIAP PLANALTLLT QLNGEWSAVL AKANVVLADV
MTPGMQSALD RLAIIGSAIE RNFSQVDVLI DLSELHGYHY QTGLVFAAYA PGLGREIARG
GRYDDIGEAF GSARPATGFS LDMRELLRFF DGSGVKDPVI YAPADYADAA LIAAVERLRA
TGRRVVMTTQ PVPAGAPHLV RQSDSTKDLW HLMGDTNHG
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