Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1974 |
Symbol | |
ID | 8535133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2109535 |
End bp | 2109855 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646384356 |
Product | protein of unknown function UPF0044 |
Protein accession | YP_003263843 |
Protein GI | 261856560 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00343693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTCA CAAACAAACA AAAACAGTTT CTGCGCGCAC AGGCCCACCA CCTCAATCCT GTCGTACTTC TTGGTCAACA CGGGCTAACC GATGCCGTCA TGGCTGAAAT CGAGCTTGCA CTGAGTATTC ACGAGCTCAT CAAAGTGCGC ATCCCCGGCC AGGATCGGGA CGACAAGAAG AATATGATGC AGCAGATCGC CACCACGACC GGTTCCGAGT TGGTGCAGTC TGTAGGGCAC ATCGCCGTGT TTTACCGCCC CGATCCGGAT GGTACGCGTT TGGCGCTACC CAAAGCCACC CCAGGAACCA ACCGTCGTTA A
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Protein sequence | MALTNKQKQF LRAQAHHLNP VVLLGQHGLT DAVMAEIELA LSIHELIKVR IPGQDRDDKK NMMQQIATTT GSELVQSVGH IAVFYRPDPD GTRLALPKAT PGTNRR
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