Gene Hneap_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1974 
Symbol 
ID8535133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2109535 
End bp2109855 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content55% 
IMG OID646384356 
Productprotein of unknown function UPF0044 
Protein accessionYP_003263843 
Protein GI261856560 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00343693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTCA CAAACAAACA AAAACAGTTT CTGCGCGCAC AGGCCCACCA CCTCAATCCT 
GTCGTACTTC TTGGTCAACA CGGGCTAACC GATGCCGTCA TGGCTGAAAT CGAGCTTGCA
CTGAGTATTC ACGAGCTCAT CAAAGTGCGC ATCCCCGGCC AGGATCGGGA CGACAAGAAG
AATATGATGC AGCAGATCGC CACCACGACC GGTTCCGAGT TGGTGCAGTC TGTAGGGCAC
ATCGCCGTGT TTTACCGCCC CGATCCGGAT GGTACGCGTT TGGCGCTACC CAAAGCCACC
CCAGGAACCA ACCGTCGTTA A
 
Protein sequence
MALTNKQKQF LRAQAHHLNP VVLLGQHGLT DAVMAEIELA LSIHELIKVR IPGQDRDDKK 
NMMQQIATTT GSELVQSVGH IAVFYRPDPD GTRLALPKAT PGTNRR