| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1961 |
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| Symbol | |
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| ID | 8535119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2097606 |
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| End bp | 2098859 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384342 |
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| Product | NADH dehydrogenase I, D subunit |
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| Protein accession | YP_003263830 |
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| Protein GI | 261856547 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00447389 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAA TTGCCAATTA TACGTTGAAC TTCGGTCCGC AGCATCCATC TGCCCACGGC
GTATTACGCC TTGTGCTGGA GATGGATGGC GAGACCATTA TTCGCGCCGA TCCGCACATC
GGTCTGCTTC ATCGTGGAAC CGAAAAACTG GCCGAGAGCA AACCTTATAA CCAGTCTATC
GGTTACATGG ATCGACTGGA TTACGTTTCC ATGATGTGCA ATGAACATGC CTATGTTCGT
GCTATCGAGC AGTTGGTCAA TCTCGAGATT CCCGAACGGG CGCAGTACAT ACGCGTTATG
TTTGACGAGA TCACCCGTAT TCTGAACCAC TTGCTCTGGC TCGGGGCGCA CGCACTGGAT
ATCGGTGCGA TGACCGTTTT CCTCTATGCC TTCCGCGAGC GGGAGGATCT GATGGATTGC
TACGAAGCGG TCTCCGGTGC GCGCTTGCAT GCCACATATT ATCGTCCGGG CGGCGTAGCG
CGGGATTTGC CCGACTCAAT GCCGCAGTAT GAGAAATCAC AGTGGCATAG CGAGCGCGAT
GTCCGTCGGA TGAACGAATC TCGCCAAGGC TCCCTGCTGG ATTTCCTCGA GGATTTCACC
CAGCGATTCC CGGGTTATGT GGACGAGTAC GAGACGCTGC TCACCGATAA TCGAATCTGG
AAACAGCGTA CGGTTGACAT TGGCATTGTT CCACCGGATC GCGCGATTGC GTTGGGTTTT
ACCGGCCCGA TGCTGCGAGG TTCCGGTATC GAGTGGGATC TGCGCAAGAA ACAGCCTTAT
GCCGTTTATG ACCAACTGGA CTTTGACATT CCTGTGGGCG TCACGGGTGA TTGCTACGAT
CGGTACCTCG TTCGCGTCGA AGAAATGCGG CAGTCCAACC GAATCATCAC GCAATGTATC
GACTGGCTAC GCAAGAATCC AGGTCCGGTC ATGGTGGATA ACCGTAAGAT CGCCCCGCCG
CGCAGAGAAG AAGTTAAGGC GGACATGGAA TCGCTGATTC ACCATTTCAA ATTGTTCACC
GAGGGTTATT GCCTCCCAGA AGGCGAGACC TATGCCGCGG TCGAGCATCC CAAGGGTGAA
TTCGGTATCT ATTTGGTGTC TGATGGCGCC AACAAACCTT ATCGCTTGAA AATCCGCGCG
CCGGGCTTTG CGCACCTTTC TGCTTTGGAC GAGATGTCGC GTGGTCACAT GCTGGCCGAT
GTCGTGGCGA TTATCGGCAC GCAAGACATT GTTTTTGGTG AGGTGGACCG TTAA
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| Protein sequence | MPEIANYTLN FGPQHPSAHG VLRLVLEMDG ETIIRADPHI GLLHRGTEKL AESKPYNQSI
GYMDRLDYVS MMCNEHAYVR AIEQLVNLEI PERAQYIRVM FDEITRILNH LLWLGAHALD
IGAMTVFLYA FREREDLMDC YEAVSGARLH ATYYRPGGVA RDLPDSMPQY EKSQWHSERD
VRRMNESRQG SLLDFLEDFT QRFPGYVDEY ETLLTDNRIW KQRTVDIGIV PPDRAIALGF
TGPMLRGSGI EWDLRKKQPY AVYDQLDFDI PVGVTGDCYD RYLVRVEEMR QSNRIITQCI
DWLRKNPGPV MVDNRKIAPP RREEVKADME SLIHHFKLFT EGYCLPEGET YAAVEHPKGE
FGIYLVSDGA NKPYRLKIRA PGFAHLSALD EMSRGHMLAD VVAIIGTQDI VFGEVDR
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