| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1953 |
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| Symbol | |
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| ID | 8535111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2088808 |
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| End bp | 2090766 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384334 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_003263822 |
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| Protein GI | 261856539 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.146282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA TCTATCTCAT CATCGCCTTG TCCCCATTGG TCGGCGCCTT GATCGCCGGT
CTGTTCGGAA AGCAGATCGG CCGTGCCGGT GCCCACTGGG TGACCAATAT CGGCGTCGGA
ATCTCGTTCA TACTCTCCTT GTACGCTTTT TACATGCATG TCTGGGGCGG GTTGCCCACC
TACGACGCCA CTGTGTATAC CTGGGCGGCA ACGGATGCGT TCCATTTCGA TGTTGGCTTC
ATGGTCGACC GCCTCACGGT TCTGATGATG GTCGTCGTCA CCAGCGTCAG TCTGATGGTG
CATATATATA CCATCGGGTA CATGGCCGAT GATCCGGGTT ACCAGCGTTT CTTCAGTTAC
ATTTCTTTGT TCACCTTCTC CATGCTCATG CTGGTGATGG CGAACAATCT GCTGCAATTG
TTCTTTGGCT GGGAAGCGGT GGGGCTGGTT TCTTACCTGC TGATCGGTTT CTGGTACAAA
AAGGAAAGCG CGATTTTTGC CAATCTCAAG GCTTTCATTG TCAACCGCGT GGGCGATTTC
GGCTTTCTGC TGGGTATTGC TGCCATCTTG ATGTACACCA ACACGCTGGA CTACGCCACG
TTCTTCGAGC GCCTGCCTGT CTTGGCCAGT GTAAAGGTCG AGTATTGGCC CGGTGTGGAA
TGGTCGTTGC CGACCGTGAT TGCCATCCTG CTGTTTATCG GCGCCATGGG TAAATCGGCT
CAGGTGCCTT TGCATGTGTG GCTGCCTGAT TCGATGGAAG GCCCGACGCC AATTTCTGCC
CTGATCCACG CCGCGACAAT GGTAACCGCC GGTATTTTCA TGGTGGCGCG CTTCTCGCCT
CTGTTCGAAA TGTCCGATGC GGCACTGTCA TTTATTATGG TGATTGGTGC GATTACAGCG
TTGTTCATGG GGTTGCTGGG CATCGTTCAG AACGACATCA AGCGCGTCAT TGCCTACTCA
ACCCTGTCCC AGCTCGGTTA TATGACTGTG GCGCTCGGTG CTTCGGCTTA CTCTGCCGCG
ATTTTTCATC TCATGACCCA TGCTTTTTTC AAGGCCTTGC TGTTCCTCGC CGCCGGCTCG
GTGATCATCG CCATGCACCA TGAACAGGAC ATCCGCAAGA TGGGTGGCCT GTGGAAGTAC
ATGCCGGTCA CGTTCATCAC CTTCCTGATC GGCTCACTGG CCTTGATCGG TTTCCCCGGT
ACATCGGGAT TCTTCTCAAA AGACAGCATC ATCCTGGCAG TTCATGCTTC CCAGCTACCC
GGCGCAACCT TCGCCTATTG GGCAGTGCTG CTGGGCGTGT TCGTGACGGC CTTCTATACC
TTCCGGATGT TTTTCCTCGT GTTCTTTGGC AAGGAGCGTA TGGATGCGCA CACGCGTTCG
CATTTGCACG AATCACCCAA AGTGGTCACG GTGCCGCTGA TTCTGTTGTC CGTACCTGCA
TTACTGGTTG GCTTCTTCGC TATTGATCCG CTCTTGTTCT CCGGTTTCTT CGAACAGGCG
ATTGTGGTTA TGCCGGGTCA TGATGCGATG GCTAATCTGC ACGAGCATTA CCATGGCGCA
TTGGCCATGA TGGGACACAG CCTGAACAGC CCTGTTTTCT GGCTTGCTAT CGCTGGCGTG
GCGCTTTCCG CTGTCATGTA TCTCATCATG CCCGGCTCGC TTCCAGCGAT GTTCGCCAAG
GTATTTGCCT GGCCGAAGCG AGTTCTGGAC GGTGCCTACG GCTTTGACGA TTTCAACAAC
GCTGTGTTCG GTGGCGGTTC ACGGTTGCTG GGGCGTGGCT TCTGGCGTAT CGGTGACGTA
CGGCTCATCG ATGGCCTGAT GGTAAATGGT ACGGCGGGCG TAATCGGTGC AACGGCCATG
AAGTGGCGCA AGCTTCAGAC GGGTTATCTC TATCACTATG CGTTTGTCAT GATTTTGGGC
TTGATCGGTT TAATGACCTG GATCGTGTTT TTACGTTGA
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| Protein sequence | MEKIYLIIAL SPLVGALIAG LFGKQIGRAG AHWVTNIGVG ISFILSLYAF YMHVWGGLPT
YDATVYTWAA TDAFHFDVGF MVDRLTVLMM VVVTSVSLMV HIYTIGYMAD DPGYQRFFSY
ISLFTFSMLM LVMANNLLQL FFGWEAVGLV SYLLIGFWYK KESAIFANLK AFIVNRVGDF
GFLLGIAAIL MYTNTLDYAT FFERLPVLAS VKVEYWPGVE WSLPTVIAIL LFIGAMGKSA
QVPLHVWLPD SMEGPTPISA LIHAATMVTA GIFMVARFSP LFEMSDAALS FIMVIGAITA
LFMGLLGIVQ NDIKRVIAYS TLSQLGYMTV ALGASAYSAA IFHLMTHAFF KALLFLAAGS
VIIAMHHEQD IRKMGGLWKY MPVTFITFLI GSLALIGFPG TSGFFSKDSI ILAVHASQLP
GATFAYWAVL LGVFVTAFYT FRMFFLVFFG KERMDAHTRS HLHESPKVVT VPLILLSVPA
LLVGFFAIDP LLFSGFFEQA IVVMPGHDAM ANLHEHYHGA LAMMGHSLNS PVFWLAIAGV
ALSAVMYLIM PGSLPAMFAK VFAWPKRVLD GAYGFDDFNN AVFGGGSRLL GRGFWRIGDV
RLIDGLMVNG TAGVIGATAM KWRKLQTGYL YHYAFVMILG LIGLMTWIVF LR
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