| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1948 |
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| Symbol | |
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| ID | 8535106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2083555 |
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| End bp | 2084688 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384329 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_003263817 |
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| Protein GI | 261856534 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0310002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA ACACGCTTAA ACGCCCGCAA GATACACGCG TGATTGTTGG CTTGTCCGGC
GGGGTGGATT CCTCGGTTGC CGCCCTGCGT TTAATCGAAG CGGGTTACCA GGTCGAAGGC
CTGTTCATGA AGAACTGGGA GGGTGATGAC AACGACGAGT ACTGCGCAGC CAAGGCCGAT
ATGCTCGATG CGTTGTCTGT TGCCGATCGC CTCGGGATCG AGTTTCATTT TGTGAATTTC
GCCCAGGATT ACTGGGATCG GGTGTTCGCC CACTTTCTGG ATGAATACCG CGCGGGTAGA
ACACCCAACC CCGACATCCT CTGCAACCGT GAAATCAAGT TTCGTGCGTT TCTCGATCAC
GCCCGAACGC TGGGCGCAGA TTACATCGCC ACAGGACACT ATGCACGTGT CCAGCACGCG
TTACCCGATG ACTCGGGCGA AACGTGCCTA TTGAAAGGAC TGGATGCCAA CAAGGACCAG
AGCTACTTCC TGCATGCGCT CAGTAGGGAA CAGCTTGCCT CGGCACTTTT TCCTATCGGT
GAAATGGAAA AGCCCGAGGT ACGGCGTATT GCCGAACAAG CGGGCTTCAA AACAGCAACC
AAAAAAGACT CCACGGGCAT CTGCTTCATC GGCGAACGTC GATTCAGCGA GTTCCTGAAG
ACCTACCTGC CGGCGCAACC GGGCGACATT GTTACCGTAG ATGGCCAGGT TGTTGGTCAA
CATCAGGGCT TGATGTATCA CACCATCGGT CAACGGCAAG GCTTGGGCAT TGGCGGGCTG
CGGGATCAGG GTGATCAACC CTGGTATGTC GCGGGGAAAA ATCTCGGGGA CAACACGCTT
ATCGTGGCTC AGGGGCAAGA TCACCCGGCG CTATTTGCCC CCGCGTTGCG CGCCGGACAG
ATTCACTGGA TCAATGATCC AACGAAGCTT GTTGGCCCCT ACCCGCTTCG CCTGACTGCC
AAGATTCGAT ACCGTCAACC CGATCAACCC TGCACAGTCA TGACTATATC CAAAGACCAG
CTCCAAGTCG TATTCGATCA GCCCCAACGC GCCATCACGC CGGGACAGTC CATCGTCTTC
TATCACGGAG ATGTCTGTCT TGGTGGCGCC GTGATTGAAG AAGCCGTAAC CTGA
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| Protein sequence | MTQNTLKRPQ DTRVIVGLSG GVDSSVAALR LIEAGYQVEG LFMKNWEGDD NDEYCAAKAD
MLDALSVADR LGIEFHFVNF AQDYWDRVFA HFLDEYRAGR TPNPDILCNR EIKFRAFLDH
ARTLGADYIA TGHYARVQHA LPDDSGETCL LKGLDANKDQ SYFLHALSRE QLASALFPIG
EMEKPEVRRI AEQAGFKTAT KKDSTGICFI GERRFSEFLK TYLPAQPGDI VTVDGQVVGQ
HQGLMYHTIG QRQGLGIGGL RDQGDQPWYV AGKNLGDNTL IVAQGQDHPA LFAPALRAGQ
IHWINDPTKL VGPYPLRLTA KIRYRQPDQP CTVMTISKDQ LQVVFDQPQR AITPGQSIVF
YHGDVCLGGA VIEEAVT
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