| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1942 |
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| Symbol | |
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| ID | 8535100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2077153 |
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| End bp | 2077656 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646384323 |
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| Product | Shikimate kinase |
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| Protein accession | YP_003263811 |
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| Protein GI | 261856528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.195968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAATA TTATTCTCAT CGGCCCCATG GGGGCAGGCA AAAGTACGAT TGGTAAACTG
CTAGCCCACA GCATGAATTT GCCTTTCTTT GACTCAGATA AGGAAATCGA GCATCGAACG
GGCGCAACCA TTCCTTTGAT ATTCGAGATT GAGGGCGAGT CAGGATTTCG GGATCGGGAA
GTTGCGGTTA TCGATGAACT CACGCAAACC TCCGGATGGG TTCTGGCTAC GGGAGGCGGA
GCGATTTTGC GTCCGGAGAA TCGGGCAGTA TTTACCGAGC GCGGCTTCGT GGTTTATCTA
CACGCTACCG TTCAGCAACA GGCGGAACGT ACCGCAATGG ATACCCAGCG ACCGCTGCTT
CAGACAAAAG ACAGAGTGGG CAAATTGAAC GAACTGATGA CGAAGCGCGA GCCGCTCTAC
CGCGAGGCTG CCGATCTTAT TATCGAAACA GCGGGGAAAT CACCGAAGTT GGTTGTGGAC
TTGATACGGC AATATCTGGA CTGA
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| Protein sequence | MNNIILIGPM GAGKSTIGKL LAHSMNLPFF DSDKEIEHRT GATIPLIFEI EGESGFRDRE
VAVIDELTQT SGWVLATGGG AILRPENRAV FTERGFVVYL HATVQQQAER TAMDTQRPLL
QTKDRVGKLN ELMTKREPLY REAADLIIET AGKSPKLVVD LIRQYLD
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