Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1940 |
Symbol | |
ID | 8535098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2074321 |
End bp | 2074872 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646384321 |
Product | Pilus assembly protein PilP |
Protein accession | YP_003263809 |
Protein GI | 261856526 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3168] Tfp pilus assembly protein PilP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCACA ATCAACCTTT TGCCCACAAG AAGAAACTAC GATCTGCCAA ATGGATGTTC GTGTTAGTGC CCGCCACACT CATGCTCAGT GGTTGTGCGA ATAACATGAA TGATCTGACA CAAAAGGTAG ATCGAATTCT CGCCAGACCA GGTGGGCAGA TCGAGCCCAT TCCTGAAATG AAACCCTTGC CAAAATTCAG TTATGTGGAA ACCAAGGATC GCACACCGTT TGCGCCAGCC GTTGCTCAGA CTGCGAACAA AGGAAGTGGC ATCACACCGG ATATGAACCG TCCCAAAGAG CCCCTAGAAA TGTATCCACT GGATGCACTG GCAATGAAGG GGGTACTCGA ACGCAAGGGC ACAAAATACG CACTTGTTCG AGATGGAGAT GGTGTCATTC ATGAAATCCA GGTGGGTAAC TACATGGGCA TGAATTACGG CAAGGTCGTC AAGATCACGA CCGACAAGAT CACGCTCGAA GAAATCGTGC CCGACGGACA GGGCGGCTGG CGCAAGCAAA CTGCGATTGT CCAGCAAAAC GCGACCAAAT GA
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Protein sequence | MRHNQPFAHK KKLRSAKWMF VLVPATLMLS GCANNMNDLT QKVDRILARP GGQIEPIPEM KPLPKFSYVE TKDRTPFAPA VAQTANKGSG ITPDMNRPKE PLEMYPLDAL AMKGVLERKG TKYALVRDGD GVIHEIQVGN YMGMNYGKVV KITTDKITLE EIVPDGQGGW RKQTAIVQQN ATK
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