Gene Hneap_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1940 
Symbol 
ID8535098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2074321 
End bp2074872 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content50% 
IMG OID646384321 
ProductPilus assembly protein PilP 
Protein accessionYP_003263809 
Protein GI261856526 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCACA ATCAACCTTT TGCCCACAAG AAGAAACTAC GATCTGCCAA ATGGATGTTC 
GTGTTAGTGC CCGCCACACT CATGCTCAGT GGTTGTGCGA ATAACATGAA TGATCTGACA
CAAAAGGTAG ATCGAATTCT CGCCAGACCA GGTGGGCAGA TCGAGCCCAT TCCTGAAATG
AAACCCTTGC CAAAATTCAG TTATGTGGAA ACCAAGGATC GCACACCGTT TGCGCCAGCC
GTTGCTCAGA CTGCGAACAA AGGAAGTGGC ATCACACCGG ATATGAACCG TCCCAAAGAG
CCCCTAGAAA TGTATCCACT GGATGCACTG GCAATGAAGG GGGTACTCGA ACGCAAGGGC
ACAAAATACG CACTTGTTCG AGATGGAGAT GGTGTCATTC ATGAAATCCA GGTGGGTAAC
TACATGGGCA TGAATTACGG CAAGGTCGTC AAGATCACGA CCGACAAGAT CACGCTCGAA
GAAATCGTGC CCGACGGACA GGGCGGCTGG CGCAAGCAAA CTGCGATTGT CCAGCAAAAC
GCGACCAAAT GA
 
Protein sequence
MRHNQPFAHK KKLRSAKWMF VLVPATLMLS GCANNMNDLT QKVDRILARP GGQIEPIPEM 
KPLPKFSYVE TKDRTPFAPA VAQTANKGSG ITPDMNRPKE PLEMYPLDAL AMKGVLERKG
TKYALVRDGD GVIHEIQVGN YMGMNYGKVV KITTDKITLE EIVPDGQGGW RKQTAIVQQN
ATK