Gene Hneap_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1939 
Symbol 
ID8535097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2073710 
End bp2074324 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID646384320 
ProductPilus assembly protein PilO 
Protein accessionYP_003263808 
Protein GI261856525 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCA ACGAACTAAA AACCCTGGAT TTCCAGACCA TCGGTCTCGC GTCGCTCGGG 
ACGCGAATGG TTATCTTCCT TTTTGTCATC GTATTGATTG TTGGTGCAGT CATTTACTTC
GACACCATGC CTCAACGGGA TGAGCTTGCT CAAAAGCAAC GCCAAGAGGC AAGTTTGCTC
GAAACAATTG GAACAAAACA AAAGTTAGCC GCAAACCTCA AGGCTTATCA GGATCAGCTC
AAGGAGATGC AGACTCGTTT TGGTGAGCTG CTCAGACAAC TGCCGAACAA AAGCGAAGCA
GAAAATCTGA TTATCGATGT TGCACAAACT TCTCTTAAGA ATGGCCTTAA GAACCAACAA
ATCCAACCGG GTCGAGAAAT CAAGCACACC TTCTATGCGG AGATGCCCTA CACGCTCACT
CTGGAAGGCA CCTACAACCA GTTGGCAAAA TTCATTAGTG ACACGGCAAA CCTGCCCAGG
ATTGTGACTT TGCACAACCC AACCATCAGG CCGGAAAAAG GAGATAAACC GGACATGAAG
TCCCCGCCGC TTGTGATGAC CATTGTGACC AAAACCTACC GTTACCTTGA ACAAGGTGAA
GGAGAAGGCA AATGA
 
Protein sequence
MDLNELKTLD FQTIGLASLG TRMVIFLFVI VLIVGAVIYF DTMPQRDELA QKQRQEASLL 
ETIGTKQKLA ANLKAYQDQL KEMQTRFGEL LRQLPNKSEA ENLIIDVAQT SLKNGLKNQQ
IQPGREIKHT FYAEMPYTLT LEGTYNQLAK FISDTANLPR IVTLHNPTIR PEKGDKPDMK
SPPLVMTIVT KTYRYLEQGE GEGK