Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1939 |
Symbol | |
ID | 8535097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2073710 |
End bp | 2074324 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646384320 |
Product | Pilus assembly protein PilO |
Protein accession | YP_003263808 |
Protein GI | 261856525 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3167] Tfp pilus assembly protein PilO |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCTCA ACGAACTAAA AACCCTGGAT TTCCAGACCA TCGGTCTCGC GTCGCTCGGG ACGCGAATGG TTATCTTCCT TTTTGTCATC GTATTGATTG TTGGTGCAGT CATTTACTTC GACACCATGC CTCAACGGGA TGAGCTTGCT CAAAAGCAAC GCCAAGAGGC AAGTTTGCTC GAAACAATTG GAACAAAACA AAAGTTAGCC GCAAACCTCA AGGCTTATCA GGATCAGCTC AAGGAGATGC AGACTCGTTT TGGTGAGCTG CTCAGACAAC TGCCGAACAA AAGCGAAGCA GAAAATCTGA TTATCGATGT TGCACAAACT TCTCTTAAGA ATGGCCTTAA GAACCAACAA ATCCAACCGG GTCGAGAAAT CAAGCACACC TTCTATGCGG AGATGCCCTA CACGCTCACT CTGGAAGGCA CCTACAACCA GTTGGCAAAA TTCATTAGTG ACACGGCAAA CCTGCCCAGG ATTGTGACTT TGCACAACCC AACCATCAGG CCGGAAAAAG GAGATAAACC GGACATGAAG TCCCCGCCGC TTGTGATGAC CATTGTGACC AAAACCTACC GTTACCTTGA ACAAGGTGAA GGAGAAGGCA AATGA
|
Protein sequence | MDLNELKTLD FQTIGLASLG TRMVIFLFVI VLIVGAVIYF DTMPQRDELA QKQRQEASLL ETIGTKQKLA ANLKAYQDQL KEMQTRFGEL LRQLPNKSEA ENLIIDVAQT SLKNGLKNQQ IQPGREIKHT FYAEMPYTLT LEGTYNQLAK FISDTANLPR IVTLHNPTIR PEKGDKPDMK SPPLVMTIVT KTYRYLEQGE GEGK
|
| |