| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1937 |
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| Symbol | |
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| ID | 8535095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2072022 |
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| End bp | 2073119 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646384318 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_003263806 |
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| Protein GI | 261856523 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01174] cell division protein FtsA
[TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTGC CATTATTTAG CTCAAAAAAT CCACGTCTCG GCGTTGATAT CAGCTCGACC
GCAGTCAAAG TGCTGCTGCT GGAGAAACAC CGAAACGGCT ATCGACCGGT TGGCTTTGCC
ATCGAACCCA TCTCACCCGG GGCGGTTCAG GACAAAACCA TTACAGACAC GGACGTTGTC
GCAGGCGCCT TAAGCAGGGC GTTGTCACGC TCTAGGGCCA AAACCAAACA CATTGTCATG
GCCGTGCCAA CCAGTGCCAG CCTCAGCCGG GTGCTTAACA TAAGCAATCC CGGCAATGAA
TTCGAACTGG AAGAGCAGGT CCGAATGGAA TCGGATCAAT ATATCCCCTT CCCTATTGAC
GAAGTCAGTC TTGACTTTGA ACCACTGCGC CCTGAAGCAG GATCAAAACA GAAAAAAAGA
CAACCCAATG AAGACAGCAC TATGCAGGTC ATCATGGCGG CCACGCGCAC AACTAATGTT
GAAGCTCGCG TTGCCGTAGC TGAAGCGGCA GGGCTATCGG TCGATGTCAT GGATGTTGAG
TCGTTTGCCA TACAAAATGC CTTCACAGAA ATCATCGCCC CAACCCTAAC AGCTGAAGAT
CGCGCCCAGC CCATCGCATT ACTGGATGTG GGCGCCAACA CCACCACAAT CAATGTGTTC
AGTGGTGATG ACATCATCTA CAGCAAGGAA CATCCATTTG GCGGCAAACA GCTAACAAAT
GAAATTTCCA TGTTTTACGG CCTCTCACCA GAAGAAGCGG AAGAAAAGAA ACGCAACGAT
ACTTTGCCCG ATGACTACCA TCGCAAAGTA CTGCAACCCT TCATCGACAA TATGGCGATG
CAAGTGGAGC GGTTCATTCA GTATTTCTAT TCAGAAACCA ATCGCGGCAC CATCGGACTG
ATTCTACTTG GCGGCGGAAC CGCAAATACC CCGGGCGTTA TCGAACGGAT TAACAATGAA
ACCGGCATAC AAACGCGCAG TGCAAATCCG TTTGTTGCCA TCGGCCAAGG ATCAAGAATA
TCAGCAGAGT TGCTCGCCAA TCATGGCTCT TCAATGCTGG TTGCTTGTGG CCTCGCTTTA
CGGAGTTTCG ACCAATGA
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| Protein sequence | MIVPLFSSKN PRLGVDISST AVKVLLLEKH RNGYRPVGFA IEPISPGAVQ DKTITDTDVV
AGALSRALSR SRAKTKHIVM AVPTSASLSR VLNISNPGNE FELEEQVRME SDQYIPFPID
EVSLDFEPLR PEAGSKQKKR QPNEDSTMQV IMAATRTTNV EARVAVAEAA GLSVDVMDVE
SFAIQNAFTE IIAPTLTAED RAQPIALLDV GANTTTINVF SGDDIIYSKE HPFGGKQLTN
EISMFYGLSP EEAEEKKRND TLPDDYHRKV LQPFIDNMAM QVERFIQYFY SETNRGTIGL
ILLGGGTANT PGVIERINNE TGIQTRSANP FVAIGQGSRI SAELLANHGS SMLVACGLAL
RSFDQ
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