| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1936 |
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| Symbol | |
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| ID | 8535094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2069506 |
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| End bp | 2071878 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646384317 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_003263805 |
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| Protein GI | 261856522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTA TCAAATTTGT TGTGTATGTG TTTGGTTTTT TGTTGATTTT TTCCGTCGGC
GGGGTGGGTA TATTGTATCA AATATACAAC AATCAACTGC CTGATGTTCA GGATCTGGCG
GCAGTCCAAT ACCAAATTCC GATGAGAATT TACGACGCTG ACGGGGGTTT GATCGCCGAA
TTTGGTGAAA AACGCCGCTT CCCGGTTACC TACGCTGAAT TGCCTAAAGT TGTCGTCGAT
GCGTTCACAT CTGCGGAAGA TGGTGGTTTT TTTGAACATG GTGGCGTGGA TGTTCAAAGC
CTGTTCCGCG CTGCTTATGA GTTGGTCAAG ACGGGTCACA AAGGACAAGG TGGCTCAACA
ATCACGATGC AGGTCGCCCG CAATTTCTTT TTGGGTAGGC AGAAAACCTA TAGCCGCAAA
TTGATGGAAA TCCTTTTGGC GATCAAGATA GAGCACACAT TGAGCAAGGA GCAGATTCTC
ACGTTGTATC TGAACAAAAT ATTTCTGGGA AATCGGACAT ATGGCGTCAA GGCCGCTGCC
CAGGTTTATT TTGGCAAGTC ACTGGATAAG TTGACGGTCG CTGAGGCCGC TATGCTGGCC
TCATTGCCCA AGGCTCCTTC GTCCGTGAAT CCTGTTTCCA ATCCCGATAA GGCGTTAGCG
CGGCGCGCTT ACGTGCTTGG GCGCATGCTT GCGCTTGGGA AAATCGATCA AGCTTCTTAT
GATCAGGCCA TGCAAGAACC CCTACCGGGA CACCTTTTTG CGAGTTCTGA AATACAAACA
CGTGCACCGT TCGTAGCAGA AATGATCCGC CAAAAATTGT TTGCCCAATA TGGTGAGAAG
GCATACGAAA TGGGGCTTGT TGTTCACACC TCAATCAATC CGAAGGCGCA GCAAGTAGCG
CGAATGTCAC TCAGAGATGG TCTGATAGCT TATGACCGCC GTCACGGTTA TCGCGGTGCG
GAGGATCATT GGGGATCGTT GCTTTCCGAC CCTAAAGCGC TTTTGGATAA ACTCCAGGAT
ACGCCTGTGG TCGGTGGGTT GATTCCGGCG GTGGTTTTGT CGGTTGATCC TAAAACGGCT
GTTGTTTTGA TGCCCGATGG TTCAAAAAAC AGTCTGGGAA TGGATGCGGT CAGTTGGGCT
TGTCGTTACG AATCGACGGA CCATTGCGGT CCCAAGCCGA AGCTGATGGG TGATGTGCTC
AAGGCGGGTG ATTTGATTCG TTTGCAGGCC GAGGCTGACC AGCATTGGAT GCTTGCAGAA
ATACCGGCGG CCAGCGCGGG CTTTGTCGCG TTGGACCCCG AAACGGGGGC TATTCGCGCA
CTTGTCGGCG GTTTCGATTT CGCGCATGAC AGCAAATTCA ATCACGTAAC TCAGGCGGAG
CGTCAGCCAG GATCAGGTTT CAAGCCATTC TTGTATTCAG CTGCTCTGGA TCATGGTTTT
ACCTTGGCAA CGATGATCAA CGATTCGCCG GTGGTAGTTA AGAACGGTGT TAAAGAAGGG
GTCGATTGGC GTCCGCAGAA TTATGAAAAG CACTTCGGTG GCCCAATGCG TTTGCGGATG
GCCTTGGTGC ATTCCGTCAA CTTGGTGTCG ATCCGTTTAA TTGAAGCACT CGGGCCCGAA
AATGTACTCA AATATGCCAG TCGTTTTGGG CTGCCCACTC AAAATTGGTC GCCTACCCCT
TCAATGGCCT TGGGTAGTTA TACCTTGACA CCATTGGAGC TGGTTGGCGG CTTCTCTGCG
TTTGTGAATG GTGGGTTCCG GATTACACCC TATGTCATTA CCGAGGTCGA CAACGGAGAT
AACGCGGTGC TTTATAGCCA TCCCTCGGTT AATTTGTGCG ATACCTGCCC GATGGACTCG
CCCGATCCGA GTGTCGCGCC GAGAATAATT ACCCCGCAAA ATGCGTTCTT GATGCGTTCT
GCTTTACGTG ATGTGGTGCG GATGGGTACG GGGGTTCGCG CCTATCGTGC CCTGAAACGA
GATGATATTG GCGGGAAAAC AGGCACAACC AACGAGCAAC GTGATGCCTG GTTCACGGGT
TTCGGGCCGG GTTGGGTCGC CACGGCGTGG GTCGGTTTCG ATGACAACTC ACCATTGGGG
CATCGCGAAG TTGGGGGTAC TGCGGCTTTA CCCATCTGGA CTGATTTCAT GAAGGTCATG
CTGCCACCGC CGACGGATAA GCCCCATGTG CCACCGCCCG GTGTGACCGA GGTCATGATC
AATCCTGATA CGGGAAATCG GTTGCCAAAA GGCGCTTCTG GTGGCGTGCG TGAGTATTTC
GATACAACAC GTGGTCCTGC GGATGAATCC GGGCTCTCCG CCCCGATTCC GGCGGACGTG
GTGCCGCAGA ATCTGATGAA TGATTTGTTT TGA
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| Protein sequence | MKLIKFVVYV FGFLLIFSVG GVGILYQIYN NQLPDVQDLA AVQYQIPMRI YDADGGLIAE
FGEKRRFPVT YAELPKVVVD AFTSAEDGGF FEHGGVDVQS LFRAAYELVK TGHKGQGGST
ITMQVARNFF LGRQKTYSRK LMEILLAIKI EHTLSKEQIL TLYLNKIFLG NRTYGVKAAA
QVYFGKSLDK LTVAEAAMLA SLPKAPSSVN PVSNPDKALA RRAYVLGRML ALGKIDQASY
DQAMQEPLPG HLFASSEIQT RAPFVAEMIR QKLFAQYGEK AYEMGLVVHT SINPKAQQVA
RMSLRDGLIA YDRRHGYRGA EDHWGSLLSD PKALLDKLQD TPVVGGLIPA VVLSVDPKTA
VVLMPDGSKN SLGMDAVSWA CRYESTDHCG PKPKLMGDVL KAGDLIRLQA EADQHWMLAE
IPAASAGFVA LDPETGAIRA LVGGFDFAHD SKFNHVTQAE RQPGSGFKPF LYSAALDHGF
TLATMINDSP VVVKNGVKEG VDWRPQNYEK HFGGPMRLRM ALVHSVNLVS IRLIEALGPE
NVLKYASRFG LPTQNWSPTP SMALGSYTLT PLELVGGFSA FVNGGFRITP YVITEVDNGD
NAVLYSHPSV NLCDTCPMDS PDPSVAPRII TPQNAFLMRS ALRDVVRMGT GVRAYRALKR
DDIGGKTGTT NEQRDAWFTG FGPGWVATAW VGFDDNSPLG HREVGGTAAL PIWTDFMKVM
LPPPTDKPHV PPPGVTEVMI NPDTGNRLPK GASGGVREYF DTTRGPADES GLSAPIPADV
VPQNLMNDLF
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