| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1934 |
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| Symbol | |
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| ID | 8535092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2067754 |
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| End bp | 2068851 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646384315 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003263803 |
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| Protein GI | 261856520 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCAG ACATCACCAC ATCAACCGCC ACGGCGACGC TCAAAAATGA CCGCTTTATT
CGCGCATTGC TTCGCGAACC GGTAGATTGC ACCCCGATCT GGATTATGCG CCAGGCTGGT
CGCTATCTGC CGGAATACAA AGCCACACGG GCAAAAGCAG GCAGCTTTAT GGATCTATGT
CGCTCGGCAG AACTCGCATG CGAAGTCACA CTGCAACCAC TTGAGCGCTT TGATCTGGAT
GCCGCCATCC TGTTCTCGGA CATCCTGACC ATCCCTGACG CCATGGGGTT GGGACTGACC
TTCTCAGCCG GAGAAGGCCC CGTCTTCGCA AACCCGCTGC GTGACCGTCG ATCTATCGAG
CAACTCCCTC TGCCCGACCC CGAAGGCGAG CTGCGCTACG TTATGGACGC AGTCAGTACC
ATCCGTGGCG CATTAAATGG CCGGGTGCCG TTGATCGGTT TTTCCGGAAG CCCCTGGACG
CTGGCCACCT ACATGGTAGA AGGCGGATCG ACCAAGGAGT TCGCCCACAT CAAAGGCTTG
ATGTACAGCG ACCCGGCGAG TGCGCACCTC CTGCTGGACA AACTCAGCAC GGCAGTGACC
GACTACCTCA ATGCCCAAGT TCGACGGGGC GCACAGGCAC TGATGATTTT CGACACCTGG
GGCGGCGTGC TGTCTCCTGA CAAATATCGG GAATTCTCAC TCGCCTACAT GAATAAAATC
GTCAGCGGCC TGATTCGTGA GCACGAGGGT CAACGTATCC CCGTCATCCT TTTTACCAAA
GGTGGCGGAG CCTGGGCACC GGAAATTGCC GCATCAGGCG CGGATGGCGT TGGACTGGAC
TGGACTGTGG ACATCGGGGC CGTGCGGCAG CAGGTTGGCG GAAAGGTCGC CCTGCAAGGC
AACCTCGATC CCAGCGTGCT GTACGCACCA GAGGCGGTGA TTGAGCAGGA AGTGGCGCGT
GTCTTGAGCT CATACGGCCA AGGTAGCGGC CATGTATTCA ACCTGGGACA CGGCATTCAC
CAACACGTCA ACCCGGATAA TGTCAAAGTA CTGGTCGATG CCGTACACCG CCTGAGCCGC
CCCTACCACC AGTCCTGA
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| Protein sequence | MTPDITTSTA TATLKNDRFI RALLREPVDC TPIWIMRQAG RYLPEYKATR AKAGSFMDLC
RSAELACEVT LQPLERFDLD AAILFSDILT IPDAMGLGLT FSAGEGPVFA NPLRDRRSIE
QLPLPDPEGE LRYVMDAVST IRGALNGRVP LIGFSGSPWT LATYMVEGGS TKEFAHIKGL
MYSDPASAHL LLDKLSTAVT DYLNAQVRRG AQALMIFDTW GGVLSPDKYR EFSLAYMNKI
VSGLIREHEG QRIPVILFTK GGGAWAPEIA ASGADGVGLD WTVDIGAVRQ QVGGKVALQG
NLDPSVLYAP EAVIEQEVAR VLSSYGQGSG HVFNLGHGIH QHVNPDNVKV LVDAVHRLSR
PYHQS
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