| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1926 |
|---|
| Symbol | |
|---|
| ID | 8535084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2059504 |
|---|
| End bp | 2060691 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646384307 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003263795 |
|---|
| Protein GI | 261856512 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00887755 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATATTT TAATGATCTC CGATGTGTAC TTTCCGCGCA TCAACGGCGT ATCGACTTCA
ATCCAGAGCT TTCGCAGCGA GTTAATCACC CTGGGACATC GGGTAACCCT GATCTGCCCG
GATTATCCCG AATCGCTCAC ACTGGAACGC GCCAAAGATC AACACGACGA TGAAGATATT
TTGCGCCTAC CGTCCCGCAC CGTGCTGCTC GACCCCGAGG ACCGGATGAT GAGTTACGGC
GCCATCATCA ATCTGATACC GATTCTGCGG GGCAGAAGCA TTGACCTCGT TCATATCCAT
ACGCCTTTCG TGGCCCATTA CGCCGGCGTA AAACTGGCCC GAAGGCTGGC CATTCCGGTC
GTCGAGAGTT ATCACACCTT CTTTGAGGAA TACCTCTACA ACTACATTCG CTGGATACCC
AGAAACTGGC TGAAGCGCGC AGCGCGTTTT TTCTCGAAAA GCCAGTGCAA CGCTGTCGAT
GCGCTTGTTG TGCCCTCCTC ACCCATGCGC AATGCCCTGC AAACCTATGG CGTGAGCACC
GAGATGCACA TCATACCGAC CGGACTCAAC CTCGATGCTT TCCGCACACC GCCAACATCG
AACTTCCGGG CCAAACTATC GATCAGAGAC GACCAACCAC TGCTGCTTTA CGTGGGCCGG
GTCGCACTGG AAAAGAACAT CGATTTCCTG TTGAACATGA TGCCCTTCGT TCTGAATCAA
ACACCCGATG CCGTTCTGGT CATTGCCGGA GAAGGCCCAG CGGAATCACA CCTCAAACGC
AGGGTTGCGG ATATGGGGTT ACAGGCTTCT GTCAAATTCG TGGGCTACAT GCGGCGGGAT
GGCGCATTGC AGGATGCCTA TCGTGCCGCC GACCTGTTCG TGTTTGCCTC CCGAACCGAA
ACTCAGGGAC TGGTTCTGCT GGAAGCACTG GCGCTCGGCA CGCCGGTTGT CGCACTGGGC
ATCATGGGCA CACTGGATGT ACTGCATGCC GATGGCGGCT GCGTGATCGC GCCGGACGAT
CCATCCGGGT TCGCCGATGC TGTCAATCAA GCCCTAAACC AACCCGATCG CTACCAGCAA
TTGGTCGATC AGGCCCCGCG TTATGCAGAA ACCTGGACCG CCGCCCAAAA GTCACAACAG
CTACTGGAAA TGTACCGGCA ACAACTCGCC AGTCATACAA CCTCTTGA
|
|---|
| Protein sequence | MHILMISDVY FPRINGVSTS IQSFRSELIT LGHRVTLICP DYPESLTLER AKDQHDDEDI
LRLPSRTVLL DPEDRMMSYG AIINLIPILR GRSIDLVHIH TPFVAHYAGV KLARRLAIPV
VESYHTFFEE YLYNYIRWIP RNWLKRAARF FSKSQCNAVD ALVVPSSPMR NALQTYGVST
EMHIIPTGLN LDAFRTPPTS NFRAKLSIRD DQPLLLYVGR VALEKNIDFL LNMMPFVLNQ
TPDAVLVIAG EGPAESHLKR RVADMGLQAS VKFVGYMRRD GALQDAYRAA DLFVFASRTE
TQGLVLLEAL ALGTPVVALG IMGTLDVLHA DGGCVIAPDD PSGFADAVNQ ALNQPDRYQQ
LVDQAPRYAE TWTAAQKSQQ LLEMYRQQLA SHTTS
|
|---|
| |