Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1922 |
Symbol | |
ID | 8535080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2055827 |
End bp | 2057068 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646384303 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
Protein accession | YP_003263791 |
Protein GI | 261856508 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0326351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGC AACGTGTGGT GGTGACTGGG TTAGGGGCAT TGACTCCTCT GGGTAATACA GTAGCAACCA GCTGGGCTGG CATTCTTGAC GGTCGCTCGG GGGTTCGCCG GATCGATCGT TTCGATGTCA GTGCGATGGC TTCGCAAATT GCTGCCACGT TGAACGATTT CGATGTCGCC CAGTTCATTC CCGCAAAAGA AATCAAGAAG ATGGAGCCAT TCATCCATTA CGGCATGGCT GCGGCGATCG AAGCGATCGA GGATGCCGGG CTGATCAGTG ACTCGTTGAA TTACGATCGT GTCGGTACGC TGATCGGTTC CGGTATTGGT GGCCTTGAGG GTATCGAACG CAACACCATG ACACTGGAGC ATCAAGGCGC ACGGCGTGTG TCGCCATTCT TCGTGCCCGG TGCGATCGTC AACATGGTGT CCGGTCAGCT ATCGATCCGC TATGGCTTTC GCGGGCCTAA TCTGGCCACC GTTACCGCCT GCGCGGCGGG TACACACAGC ATTGGTCAGG CGGCACGCTT GATTGCCTAT GGCGATGCGG ATGTGATGAT TGCCGGCGGC TCCGAAGGCG CCGTTTCTCC GCTGGGCGTG GCCGGTTTCT CCGCTGCGCG CGCGTTATCG ACCCGTAACG ATGACCCCGA ACACGCCTCG CGGCCTTGGG ATAAAGACCG TGATGGGTTT GTGCTCGGCG AAGGGGCGGG TGTGCTTGTG CTTGAATCGT ATGACCATGC AAAAGCGCGC GACGCCCACA TTTACGGTGA GCTAATCGGT TTTGGCATGA GTGCCGATGC TTATCACATG ACAGCGCCTT CCGCAGATGG CGACGGCGCG CGTCGTTGTA TGCTGGCGGC GATGCAGGAT GCCAAGCTCA ATCCCGAAGA CATCGGTTAC GTGAACGCGC ATGGCACATC GACGCAAGCC GGTGATATGG CAGAAGTGGC GGCATTGCAC GCCGCGTTCG GTGACTACGC CAAACGCTGC CCGGTCAGTT CGACCAAATC CATGACAGGC CACTTGTTGG GAGCCGCGGG TGGAATCGAA GCGGTATTCT CCTTGCTGGC CCTGCGCGAC CAAGTGCTGC CACCGACGGT GAATCTGTTT GAGCCATCCG AAGGCTGTGA TCTGGATTTC GTGCCGCATA CCGCGCGCCA AGTGAGCGGC CTTGATGTGG TTATGTCGAA CTCCTTCGGT TTTGGCGGCA CCAATGGCAC GCTGATTTTC CGGCGCTTAT GA
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Protein sequence | MSKQRVVVTG LGALTPLGNT VATSWAGILD GRSGVRRIDR FDVSAMASQI AATLNDFDVA QFIPAKEIKK MEPFIHYGMA AAIEAIEDAG LISDSLNYDR VGTLIGSGIG GLEGIERNTM TLEHQGARRV SPFFVPGAIV NMVSGQLSIR YGFRGPNLAT VTACAAGTHS IGQAARLIAY GDADVMIAGG SEGAVSPLGV AGFSAARALS TRNDDPEHAS RPWDKDRDGF VLGEGAGVLV LESYDHAKAR DAHIYGELIG FGMSADAYHM TAPSADGDGA RRCMLAAMQD AKLNPEDIGY VNAHGTSTQA GDMAEVAALH AAFGDYAKRC PVSSTKSMTG HLLGAAGGIE AVFSLLALRD QVLPPTVNLF EPSEGCDLDF VPHTARQVSG LDVVMSNSFG FGGTNGTLIF RRL
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