Gene Hneap_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1922 
Symbol 
ID8535080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2055827 
End bp2057068 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content58% 
IMG OID646384303 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_003263791 
Protein GI261856508 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0326351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGC AACGTGTGGT GGTGACTGGG TTAGGGGCAT TGACTCCTCT GGGTAATACA 
GTAGCAACCA GCTGGGCTGG CATTCTTGAC GGTCGCTCGG GGGTTCGCCG GATCGATCGT
TTCGATGTCA GTGCGATGGC TTCGCAAATT GCTGCCACGT TGAACGATTT CGATGTCGCC
CAGTTCATTC CCGCAAAAGA AATCAAGAAG ATGGAGCCAT TCATCCATTA CGGCATGGCT
GCGGCGATCG AAGCGATCGA GGATGCCGGG CTGATCAGTG ACTCGTTGAA TTACGATCGT
GTCGGTACGC TGATCGGTTC CGGTATTGGT GGCCTTGAGG GTATCGAACG CAACACCATG
ACACTGGAGC ATCAAGGCGC ACGGCGTGTG TCGCCATTCT TCGTGCCCGG TGCGATCGTC
AACATGGTGT CCGGTCAGCT ATCGATCCGC TATGGCTTTC GCGGGCCTAA TCTGGCCACC
GTTACCGCCT GCGCGGCGGG TACACACAGC ATTGGTCAGG CGGCACGCTT GATTGCCTAT
GGCGATGCGG ATGTGATGAT TGCCGGCGGC TCCGAAGGCG CCGTTTCTCC GCTGGGCGTG
GCCGGTTTCT CCGCTGCGCG CGCGTTATCG ACCCGTAACG ATGACCCCGA ACACGCCTCG
CGGCCTTGGG ATAAAGACCG TGATGGGTTT GTGCTCGGCG AAGGGGCGGG TGTGCTTGTG
CTTGAATCGT ATGACCATGC AAAAGCGCGC GACGCCCACA TTTACGGTGA GCTAATCGGT
TTTGGCATGA GTGCCGATGC TTATCACATG ACAGCGCCTT CCGCAGATGG CGACGGCGCG
CGTCGTTGTA TGCTGGCGGC GATGCAGGAT GCCAAGCTCA ATCCCGAAGA CATCGGTTAC
GTGAACGCGC ATGGCACATC GACGCAAGCC GGTGATATGG CAGAAGTGGC GGCATTGCAC
GCCGCGTTCG GTGACTACGC CAAACGCTGC CCGGTCAGTT CGACCAAATC CATGACAGGC
CACTTGTTGG GAGCCGCGGG TGGAATCGAA GCGGTATTCT CCTTGCTGGC CCTGCGCGAC
CAAGTGCTGC CACCGACGGT GAATCTGTTT GAGCCATCCG AAGGCTGTGA TCTGGATTTC
GTGCCGCATA CCGCGCGCCA AGTGAGCGGC CTTGATGTGG TTATGTCGAA CTCCTTCGGT
TTTGGCGGCA CCAATGGCAC GCTGATTTTC CGGCGCTTAT GA
 
Protein sequence
MSKQRVVVTG LGALTPLGNT VATSWAGILD GRSGVRRIDR FDVSAMASQI AATLNDFDVA 
QFIPAKEIKK MEPFIHYGMA AAIEAIEDAG LISDSLNYDR VGTLIGSGIG GLEGIERNTM
TLEHQGARRV SPFFVPGAIV NMVSGQLSIR YGFRGPNLAT VTACAAGTHS IGQAARLIAY
GDADVMIAGG SEGAVSPLGV AGFSAARALS TRNDDPEHAS RPWDKDRDGF VLGEGAGVLV
LESYDHAKAR DAHIYGELIG FGMSADAYHM TAPSADGDGA RRCMLAAMQD AKLNPEDIGY
VNAHGTSTQA GDMAEVAALH AAFGDYAKRC PVSSTKSMTG HLLGAAGGIE AVFSLLALRD
QVLPPTVNLF EPSEGCDLDF VPHTARQVSG LDVVMSNSFG FGGTNGTLIF RRL