Gene Hneap_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1883 
Symbol 
ID8535041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand+ 
Start bp2018942 
End bp2019577 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID646384264 
Productprotein of unknown function DUF205 
Protein accessionYP_003263752 
Protein GI261856469 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.331634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTCT CATCTGGGCC GGCATTGGTC GGCATCGCCA TCGTCAGCTA TCTTATAGGC 
TCGATCGCCA GCGCCGTGCT TGTAGCGCGA CTGTTCCATC TTCCCGATCC GCGCCAAGCG 
GGCTCCGGCA ACCCCGGCGC GACGAACGTT CTGCGTCTGG GCGGAAAAAA AGCCGCGCTG 
CTGACGCTAC TTGGTGATCT CGGCAAAGGC TTGCTGCCCG TACTGATATT ACGCGCCTTG 
AATGCCCCCG AAGTCGCCTT GGCCGTAGCC GCCCTGGCCG CGTTCGTCGG CCATATTTTC 
CCCGTATTTT TTGGGTTCAA AGGCGGAAAA GGCGTTGCGA CCGCAGCCGG TGCCTTGCTC 
GCACTCAATC CATTGATTGG CCTGATTACG GTTGGCACCT GGTTAGCCAG CGCCTTTATT 
ACCCGCTATT CCTCGCTTTC CGCGATTCTT GCGGCGGTTG TAGCAGCCTC CAGCGCCCTG 
TATCTGGCAC CACCTGCCAC CATGGTAGCA GTGAGCTTAA TGGCCATGAT GCTGATTTAC 
CGGCACCACC GAAACATTCG CCGCCTAATT AACGGCGAAG AACCTAAAAT CGGCAAAAAG 
AGCGATTCGG GCAATCAACC TGAAACACCG ACCTGA
 
Protein sequence
MDFSSGPALV GIAIVSYLIG SIASAVLVAR LFHLPDPRQA GSGNPGATNV LRLGGKKAAL 
LTLLGDLGKG LLPVLILRAL NAPEVALAVA ALAAFVGHIF PVFFGFKGGK GVATAAGALL 
ALNPLIGLIT VGTWLASAFI TRYSSLSAIL AAVVAASSAL YLAPPATMVA VSLMAMMLIY 
RHHRNIRRLI NGEEPKIGKK SDSGNQPETP T