Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1883 |
Symbol | |
ID | 8535041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2018942 |
End bp | 2019577 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646384264 |
Product | protein of unknown function DUF205 |
Protein accession | YP_003263752 |
Protein GI | 261856469 |
COG category | [S] Function unknown |
COG ID | [COG0344] Predicted membrane protein |
TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.331634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATTTCT CATCTGGGCC GGCATTGGTC GGCATCGCCA TCGTCAGCTA TCTTATAGGC TCGATCGCCA GCGCCGTGCT TGTAGCGCGA CTGTTCCATC TTCCCGATCC GCGCCAAGCG GGCTCCGGCA ACCCCGGCGC GACGAACGTT CTGCGTCTGG GCGGAAAAAA AGCCGCGCTG CTGACGCTAC TTGGTGATCT CGGCAAAGGC TTGCTGCCCG TACTGATATT ACGCGCCTTG AATGCCCCCG AAGTCGCCTT GGCCGTAGCC GCCCTGGCCG CGTTCGTCGG CCATATTTTC CCCGTATTTT TTGGGTTCAA AGGCGGAAAA GGCGTTGCGA CCGCAGCCGG TGCCTTGCTC GCACTCAATC CATTGATTGG CCTGATTACG GTTGGCACCT GGTTAGCCAG CGCCTTTATT ACCCGCTATT CCTCGCTTTC CGCGATTCTT GCGGCGGTTG TAGCAGCCTC CAGCGCCCTG TATCTGGCAC CACCTGCCAC CATGGTAGCA GTGAGCTTAA TGGCCATGAT GCTGATTTAC CGGCACCACC GAAACATTCG CCGCCTAATT AACGGCGAAG AACCTAAAAT CGGCAAAAAG AGCGATTCGG GCAATCAACC TGAAACACCG ACCTGA
|
Protein sequence | MDFSSGPALV GIAIVSYLIG SIASAVLVAR LFHLPDPRQA GSGNPGATNV LRLGGKKAAL LTLLGDLGKG LLPVLILRAL NAPEVALAVA ALAAFVGHIF PVFFGFKGGK GVATAAGALL ALNPLIGLIT VGTWLASAFI TRYSSLSAIL AAVVAASSAL YLAPPATMVA VSLMAMMLIY RHHRNIRRLI NGEEPKIGKK SDSGNQPETP T
|
| |