| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1871 |
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| Symbol | |
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| ID | 8535029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2006177 |
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| End bp | 2007430 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384252 |
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| Product | Glycine hydroxymethyltransferase |
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| Protein accession | YP_003263740 |
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| Protein GI | 261856457 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0163056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCAA AGACGATGTC GATTGCAGAT TTCGATCCCG TACTGGCTCA AGCCATGGCG
GACGAAGTGG TGCGCCAGGA AGATCACGTC GAACTGATCG CATCCGAAAA CTATGCCAGC
CCGCGTGTCA TGGAAGCCCA AGGTTCGGTG CTGACCAACA AGTATGCCGA AGGTTATCCG
GGCAAACGTT ACTACGGCGG CTGTGAGTAT GTCGATGTGG CCGAGCAATT GGCAATCGAT
CGTGCAAAGG AGTTGTTCGG CGCCGATTAT GCCAACGTTC AGCCGCACTC CGGCTCACAG
GCGAACGCCG CGGTGTTCAT GGCTTTGATC AACCCCGGTG ACACGATTCT CGGTATGAGC
CTTGCGCATG GCGGTCATCT GACGCACGGG GCTAAGGTGA ATTTTTCCGG CAAGATCTAC
AACGCCGTTC AATATGGCAT CGATGAGCAA GGCTATATCG ATTACAGCGA AGTCGAGTCT
CTGGCGCGTG AGCACAAGCC AAAATTGATT GTTGCCGGTT TTTCCGCGTA CTCCCGCGTG
ATTGATTGGT CTCGTTTCCG TGCGATTGCC GATGAGGTAG GTGCTTACCT GCTCGTTGAT
ATGGCACACG TGGCTGGTCT GGTCGCGGCG GGTGTTTATC CCAGCCCTGT CCAGATCGCC
GATGTCACGA CCTCGACCAC GCACAAAACC CTGCGCGGCC CACGCGGTGG CATCATCCTC
GCCAAAGCCA ACCCCGAAGT GGAAAAGAAA CTCAATTCCT TGGTTTTCCC CGGCACACAG
GGCGGCCCAT TGATGCATGT GATTGCCGCC AAGGCCGTCG CGTTCAAGGA AGCCCTTGAG
CCTTCGTTCA AAACGTACCA GCAACAGGTT GTTGACAACG CGCGCGCGAT GGCCAAGGTG
TTTGTCGAGC GTGGCCTGGA TGTGGTTTCC GGCGGTACGG ACAATCATTT GTTCCTCGTT
AGCCTGGTGA AAAAGGGTCT GACCGGTAAA GCGGTCGACG CGGCCCTGGG CCAAGCGCAT
ATCACTGTAA ACAAAAACGC CGTGCCCAAT GATCCGCAGT CACCTTTCGT GACCTCTGGT
ATTCGTGTCG GCACCGCTGC CATCACGACG CGCGGATTTG GTATTCAGGA AGCCACCGAA
TTGGCAGGCT GGATGTGCGA TGTGATCGAC GCCGTTGACG ATGCGGCCGT CATCGCCGAA
GTGCGTGGCA AGGTCACTGC ATTGTGCCGT CGCTTCCCGG TCTACGGTAA GTAA
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| Protein sequence | MFSKTMSIAD FDPVLAQAMA DEVVRQEDHV ELIASENYAS PRVMEAQGSV LTNKYAEGYP
GKRYYGGCEY VDVAEQLAID RAKELFGADY ANVQPHSGSQ ANAAVFMALI NPGDTILGMS
LAHGGHLTHG AKVNFSGKIY NAVQYGIDEQ GYIDYSEVES LAREHKPKLI VAGFSAYSRV
IDWSRFRAIA DEVGAYLLVD MAHVAGLVAA GVYPSPVQIA DVTTSTTHKT LRGPRGGIIL
AKANPEVEKK LNSLVFPGTQ GGPLMHVIAA KAVAFKEALE PSFKTYQQQV VDNARAMAKV
FVERGLDVVS GGTDNHLFLV SLVKKGLTGK AVDAALGQAH ITVNKNAVPN DPQSPFVTSG
IRVGTAAITT RGFGIQEATE LAGWMCDVID AVDDAAVIAE VRGKVTALCR RFPVYGK
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