| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1868 |
|---|
| Symbol | |
|---|
| ID | 8535026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2003738 |
|---|
| End bp | 2004388 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646384249 |
|---|
| Product | riboflavin synthase, alpha subunit |
|---|
| Protein accession | YP_003263737 |
|---|
| Protein GI | 261856454 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0165858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACCG GCATTATTCA GTCTGTAGGG TCAATGCAAA CCTTGGCGCC CAAGGGCGGT
GATATCCAAT TGACGATCGA TGCGGGCAAG CTGGATATGA ACAAGATCGC CTTGGGTGAC
AGCATCGCGG TTAATGGCGT ATGTTTGACC GTCACAGCTT TTGACGCGCA TAGTTTTACC
GTGGATTGTT CGCGCGAGAC GCTAAAGTTC ACCACGCTTG GTCATCTGAA ACCGGGTTCG
CCGGTGAATC TTGAAACGGC ACTGACCTTG TCCACGCCGT TGGGTGGGCA TTTGGTGAGT
GGTCATGTCG ATGGTCTGGC CGAGGTGGAA TCACGCAGCG AGGACGCGCG GGCGACCAGT
TTCTGGCTGC GGGCGCCCGA TGATTTATCG AAGTACATCG CGAAAAAAGG ATCGGTGACC
ATCGATGGCG TCAGCCTGAC TGTCAATGAT GTCGATGGCG CTCGATTCCG ACTGACCATC
ATCCCGCATA CATTGGAGCA AACCATCATG GGGCGGTATC AGGCGGGAGG CTCGGTTAAT
CTCGAAATCG ACGTGGTGGC ACGTTATCTC GAACGATTGC TGGCAGGGCA AGCGCATTCT
GCCAAACATC CCTATGCCGA CCTGCTGGGT TCACCTTATT CGGCTGGTTG A
|
|---|
| Protein sequence | MFTGIIQSVG SMQTLAPKGG DIQLTIDAGK LDMNKIALGD SIAVNGVCLT VTAFDAHSFT
VDCSRETLKF TTLGHLKPGS PVNLETALTL STPLGGHLVS GHVDGLAEVE SRSEDARATS
FWLRAPDDLS KYIAKKGSVT IDGVSLTVND VDGARFRLTI IPHTLEQTIM GRYQAGGSVN
LEIDVVARYL ERLLAGQAHS AKHPYADLLG SPYSAG
|
|---|
| |