| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1863 |
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| Symbol | |
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| ID | 8535021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1999475 |
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| End bp | 2000407 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646384244 |
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| Product | Histone deacetylase |
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| Protein accession | YP_003263732 |
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| Protein GI | 261856449 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.187886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTG CTTACATAAC ACATCCGGAT TGCCTGCTGC ACAGTAATGG CCTCATCAGT
GGCATGCCGC ATCCGGAAAA CCAACGTCGA CTCACTGAAA TTCAGGATCA TCTGATCGCC
CAGGGCATCG AACCCTGGCT GGTTCATCTG ACTGCTCCGG TTGCCACCAA AGAGCAACTC
TGCCTTGCTC ATGATCAGGC GTATGTCGAA GATGTTTTTC AGAATGCGCC GGAGGTTGGC
GGGTTTTTGT ACGATCAGGA CGTCGTGATG ATGCCGCACA CGCTCTCCGC CGCGCGTCAT
GCAGCCGGCA GCGGCATTGC CGCCGTCGAC TGGGTTATGG CTCAACCGAA CCGACGCGCC
TTCTGCGCCA TCCGCCCACC GGGGCATCAT GCAGGAAAAC ACAAAGCAGC CGGGTTCTGC
CTGTTCAACA ATGCGGCCAT CGCCTGCTAT CACGCGCTGA CGAATGCTGG AATCGAGCGG
GTGGCCATAG TCGATTTCGA TGTGCACCAT GGTGATGGCA CGGAAGACAT CGTGGCGGGC
GACGAGCGAA TCCTGTTCTG CTCAAGCTTT CAGCATCCGT TCTATCCGTA TAGCGGCGTT
TCGCCCTCTG CCGAGAACTG TCTCCCCGTT CCCCTGCCCC AAGGCACCCG GGGCGATACT
TGGCGTAGCG CCGTATCGGC AGCGTGGTTC GAACGCCTCG ATGCCTTCGC ACCCCAGCTG
ATTGTTATCT CAGCAGGTTT CGACGGCCAC CTGCTCGATG ACATGGGCGG TTGGGGGCTG
GTAGAGGCCG ACTATGAATG GCTGACACAG CAATTGGTAC ACATCGCCAA CCGCCATGCC
AAGGGCAGAA CAATTTCTTT ACTGGAAGGC GGTTATGAAC CGCACGCGCT GGCACGCAGC
GTGGCTGCGC ATATCACGGC ATTACAGGCC TGA
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| Protein sequence | MNLAYITHPD CLLHSNGLIS GMPHPENQRR LTEIQDHLIA QGIEPWLVHL TAPVATKEQL
CLAHDQAYVE DVFQNAPEVG GFLYDQDVVM MPHTLSAARH AAGSGIAAVD WVMAQPNRRA
FCAIRPPGHH AGKHKAAGFC LFNNAAIACY HALTNAGIER VAIVDFDVHH GDGTEDIVAG
DERILFCSSF QHPFYPYSGV SPSAENCLPV PLPQGTRGDT WRSAVSAAWF ERLDAFAPQL
IVISAGFDGH LLDDMGGWGL VEADYEWLTQ QLVHIANRHA KGRTISLLEG GYEPHALARS
VAAHITALQA
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