| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1857 |
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| Symbol | |
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| ID | 8535015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1991957 |
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| End bp | 1992658 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646384238 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_003263726 |
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| Protein GI | 261856443 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5581] Predicted glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00785835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGC AAGATACCAT TATTACGGCA CGGAGCCCCC GCATCATCGA CAAGATACTT
GCGCGACATT TTGAGGAACG TGGGCATTTC TGGTTGATCC CTGAAGGGGA TGAAGATTTT
CAGATTGCGG TTCAGATGGT CTCTAATGAT CCGGAAAACC GCCGTTTTTT AATTGACCAG
CCTAAGGAAG TCCCCTTGAG GCACCTCAAG GCTTCCGGCC GGATTCGGGT GCAGGCGGTT
ATCGACCAGT TGGTTTCATG GTTTTATGTC AATGATCTTA AAGAGAAGAT TGAGGGCACC
GACCGGTACT TTGAGATTCC CTACCCTGCT CAAATAGATC GTTTGCAACG CCGGAATGTG
TTTCGAGTGC ATATTCCACC TGATGTCATT GGTGTGGTGG AGTTTTTCCA GCCGACAACA
AGTACCCTTT GGGTCGGGCG TTTAGATGAT CTTTCTGCCG GCGGTTGTGC AATCGCACTG
CGTCCCGATC AGGCTATCGG TTTGGATTTA GGGGTGCAAT TGTCCCCGGT GAAATTGTCC
ATTGATGGTT TTGCCGATCT GTCGGTGAAT CTCGTGATTC GCAATCAGCG CATTGTTTCC
CCGGGCGAGT GGATCTTTGG GGCCGAGTTT GTCGATCTTG GCCCGCTTGA GTCGCAGCAG
TTGGATCGGG TCGTCATGCG GTTACAGCGA TACTTGATTT GA
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| Protein sequence | MSQQDTIITA RSPRIIDKIL ARHFEERGHF WLIPEGDEDF QIAVQMVSND PENRRFLIDQ
PKEVPLRHLK ASGRIRVQAV IDQLVSWFYV NDLKEKIEGT DRYFEIPYPA QIDRLQRRNV
FRVHIPPDVI GVVEFFQPTT STLWVGRLDD LSAGGCAIAL RPDQAIGLDL GVQLSPVKLS
IDGFADLSVN LVIRNQRIVS PGEWIFGAEF VDLGPLESQQ LDRVVMRLQR YLI
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