| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1842 |
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| Symbol | |
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| ID | 8535000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1976774 |
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| End bp | 1977919 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384223 |
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| Product | twitching motility protein |
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| Protein accession | YP_003263711 |
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| Protein GI | 261856428 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.236681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCC AGCAAGCAGC TAACTACGTT CAGGGCTTAT TACGCAAAGC AGTGGAGCTT
GATGCCTCCG ACCTATTCGT AACGGTAGGC GCCCCACCGA GTGCAAAAAT CAACGGGGAA
ATCACCCACC TGACCGAAAC AAGCTTGTCG ACCAACCATA CCCAAATGTT GGTTCGGTCG
ATCATGACCG ACAAGCAGAT CGCCTCGTTT GAAGAAACGC GCGAAGCGAA TTTCGCGATT
TCTCTGCCCG GTGTCGCCCG CTTCCGTGTC AATGCGTTCA TGCAGCGCGG CAGTGTGGGG
ATGGTTCTGC GGATGATTCG ATCCGACGTG CCCAAATTCT CCGAATTGTT ATTACCAGAA
ATCCTCGAAA CCATTTCCAT GACCAAACGT GGCTTGGTGA TTTTCGTTGG CGCGACCAGC
TCGGGGAAGT CGACCTCGCT TGCTGCCATG CTCGATTACC GCAACGAAAA CTCGGCAGGC
CACATTGTTA CCATCGAAGA CCCGATTGAA TACGTGCACC GACACAAAGG TTGCCTTGTG
ACCCAGCGTG AAGTGGGCGT GGACACCGAT ACGTTCGAAT CGGCGTTGAA AAACACCCTT
CGACAAGCGC CAGATGTCAT CCTGATTGGC GAAATCAGGG ATCGCGAAAC GATGGATCAT
GCCATTGCCT TCGCCGAAAC CGGGCATCTT TGCCTGGCTA CGCTGCACGC CAACAACACC
AATCAGGCAC TGGACCGCAT CATCAACTTC TTTCCGGAAG AACGTCGCCA TCAACTGCTG
ATGGACCTTT CCCTGAACCT GAAATCGGTT GTTTCCCAAC GGCTGCTGCG CAAGGAAGAC
GGTAACGGCC GCGTTCCAGC GGTCGAAGTG TTGATCAACA CGCCATTGAT CGGCGACCTG
ATCTTCAAGG GCGACGTGCA CGAAATCAAG GAAGTGATGA AACGCTCCCG CGAACACGGC
ATGCAAACTT TCGACCAAGC GTTGCTGGAT CTGTACGACG AAGGCCTGGT GTCCTTCCAG
GAAGCCCTGC GCAATGCGGA TTCACAAAAC GACCTTCGCC TTAATATCAA ACTGCACAGT
CGTCGCGGCC TACCGAAGGA CTTCGAGGAT GGGAACGATC AATTGCGCGT TGAAAGTGAT
GATTGA
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| Protein sequence | MDRQQAANYV QGLLRKAVEL DASDLFVTVG APPSAKINGE ITHLTETSLS TNHTQMLVRS
IMTDKQIASF EETREANFAI SLPGVARFRV NAFMQRGSVG MVLRMIRSDV PKFSELLLPE
ILETISMTKR GLVIFVGATS SGKSTSLAAM LDYRNENSAG HIVTIEDPIE YVHRHKGCLV
TQREVGVDTD TFESALKNTL RQAPDVILIG EIRDRETMDH AIAFAETGHL CLATLHANNT
NQALDRIINF FPEERRHQLL MDLSLNLKSV VSQRLLRKED GNGRVPAVEV LINTPLIGDL
IFKGDVHEIK EVMKRSREHG MQTFDQALLD LYDEGLVSFQ EALRNADSQN DLRLNIKLHS
RRGLPKDFED GNDQLRVESD D
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