| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1841 |
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| Symbol | |
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| ID | 8534999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1975671 |
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| End bp | 1976720 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384222 |
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| Product | twitching motility protein |
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| Protein accession | YP_003263710 |
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| Protein GI | 261856427 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.616267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAC AACGCGGTAT TGATTCCCTT CTTACGTTTT CAGTAAAAAA CGGCGCCTCA
GATCTTCATC TGTCTGCCGG TGAGCAGCCT CGCGTGCGGA TCGACGGCGA TGTGCGCAAA
GTCAACGTGC CCGTTATGGA GCACAAAGAC GTGCACGCCA TGGTGTACGA CATCATGAAC
GACAAGCAAC GCAAGGAATA CGAAGATAAT CTTGAGGTGG ATTTTTCGTT CGAACTTCCC
GGCGTGGCTC GCTTCCGGGT TAACGCATTC AACCAGAACC GCGGAGCGGC TGCGGTATTT
CGAACCATTC CCAGTGAAAT CCTATCTCTT GAACAATTGG CCACGCCAAG TGTGTTCAAG
GATTTGTGCC TGTTTCCGCG CGGCATCGTG CTGGTCACCG GCCCGACGGG TTCCGGTAAA
TCAACGACTC TGGCCGCGAT GATCGATTAC ATCAACGATA ATCGTAACGA CCACATTCTG
ACGATCGAAG ACCCGATCGA ATTCGTTCAC AACAGTAAAA AGTGCCTGAT CAACCAACGT
GAAGTGCATC GCGATACCCA CAGTTTCAAT GCGGCACTTC GCTCGGCCTT ACGCGAAGAT
CCCGATGTGA TTCTGGTCGG CGAGTTGCGC GATCTGGAAA CCATCCGTCT GGCGCTCACC
GCAGCGGAAA CCGGCCACCT GGTGTTTGCG ACCTTGCACA CAAGTTCTGC CGCCAAAACC
ATCGACCGCG TGGTGGATGT GTTCCCCGCT GCGGAGAAAG ATATGGTTCG TTCGATGCTG
TCAGAATCAC TACGCGCTGT AATCTCCCAA ACACTGCTCA AGAAAATCGG TGGTGGGCGG
ATTGCTGCGC ACGAGATCAT GCTGGGCAGC CCGGCGATTC GTAACCTGAT CCGTGAAAAC
AAAATCGCCC AAATGTACTC GGCCATTCAA ACCGGCCAAA CACAGGGCAT GCAGACACTC
GATCAGAACT TGCAGCAGCT CGTCAAACGC GGGCTGGTCG CTAAAGACGA AGCCCGTGCC
AGAGCACAAA ACAAAACGGA CTTCATGTAA
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| Protein sequence | MAEQRGIDSL LTFSVKNGAS DLHLSAGEQP RVRIDGDVRK VNVPVMEHKD VHAMVYDIMN
DKQRKEYEDN LEVDFSFELP GVARFRVNAF NQNRGAAAVF RTIPSEILSL EQLATPSVFK
DLCLFPRGIV LVTGPTGSGK STTLAAMIDY INDNRNDHIL TIEDPIEFVH NSKKCLINQR
EVHRDTHSFN AALRSALRED PDVILVGELR DLETIRLALT AAETGHLVFA TLHTSSAAKT
IDRVVDVFPA AEKDMVRSML SESLRAVISQ TLLKKIGGGR IAAHEIMLGS PAIRNLIREN
KIAQMYSAIQ TGQTQGMQTL DQNLQQLVKR GLVAKDEARA RAQNKTDFM
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