| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1840 |
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| Symbol | |
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| ID | 8534998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1974685 |
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| End bp | 1975356 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384221 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003263709 |
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| Protein GI | 261856426 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.656841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATTCAC TACATGAGCG CTTCTCCAGT ATAAAAAACC GTATCGAACG TGCATCACAT
GCTGTTGGGC GACCCGATGG CTCTGTGGTT TTGATCGCTG TCAGCAAGCG ACAAACGATT
GAAGCCATGG CGCAACTGGC CAGCCTGGGG CAGCGTGATT TCGGCGAAAG CTATCTGCAA
GAGGCTTTGG ATAAGCAGTC GGCTCTGGCT GATCAGCCGG TTGGAGCATC GATAGTCTGG
CATTTTATCG GGCCGATACA GTCCAATAAA ACACGAGGAA TAGCCGAGAA TTTTTCTTGG
GTGCATAGTG TGGATCGACC TAAAATTGCG CAGCGCTTAA ACGACCAGCG CCCGATCGAA
TTGCCACCGC TGAATGTCCT GATCGAAGTC AATATCGATG GCGAAGCCAG CAAGTCGGGC
GTACTGCCCG AGCAGTTGCC TGGGATGGTA GACATCTTTC AAAATCTCCC TCGCTTGAAG
CTGATGGGTT TGATGGCGAT TCCTGCGCCG GGCTCCTCTG ACGGATTTTG TCGCTTGGCC
GCACTCAATG CCCGTCTCGA ATCACCGCTT CCGGTTCTGT CCATGGGGAT GAGTGACGAT
TTTGAGGCGG CCATTGCGGC AGGCAGCACG CATGTTCGTG TGGGTTCGGC CTTGTTCGGT
CCTCGCCAGT AA
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| Protein sequence | MNSLHERFSS IKNRIERASH AVGRPDGSVV LIAVSKRQTI EAMAQLASLG QRDFGESYLQ
EALDKQSALA DQPVGASIVW HFIGPIQSNK TRGIAENFSW VHSVDRPKIA QRLNDQRPIE
LPPLNVLIEV NIDGEASKSG VLPEQLPGMV DIFQNLPRLK LMGLMAIPAP GSSDGFCRLA
ALNARLESPL PVLSMGMSDD FEAAIAAGST HVRVGSALFG PRQ
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