Gene Hneap_1832 details

Gene Information

• Locus tag: Hneap_1832
• ID: 8534990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 1966343
• End bp: 1966957
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646384213
• Product: cold-shock DNA-binding domain protein
• Protein accession: YP_003263701
• Protein GI: 261856418
• COG category: [S] Function unknown
• COG ID: [COG3326] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAGCCA AAGGTAAAAT TGTTCGTTGG CAGGATGCGA AAGGTTTTGG CTTTATTCAT 
CCATTGGATG GTGGTGCGGA TGTGTTCGTG CATATTCGCT CATTCACAAA TCGTCAGAGA 
AGGCCGGTAG ACGGTGAGAT TGTCACCTAT ACCGTTGAAC ATGATGCCCA GAATCGTAAG 
CGGGCTAGCG ACATAGTATT CGCCGGAGAG GCACCTCCTT CCGAGAGAAA ACAGACTGCT 
ATCGGTGCAG GTATTCTGCT CTCATTGTTG TTCCTGATTG TGTTGGGTGT GCTGTCTTTA 
ATGGACAGAG TGCCGTTGGT ACTGTTTGGT TTTTACGTCG TGCTCAGCCT GATTACGATT 
TTGGCTTATG GCTTGGATAA GTCGGCGGCT CAGCACAATC GCTGGCGTAC TCAGGAGAAT 
ACACTTCATC TTTTCTCGCT TTTTGGTGGC TGGCCGGGCG CCTTGATTGC ACAGAATATC 
TTTCGGCATA AAACAAAAAA GCAGCCTTTT CAGACGGTTT TCTGGTTGAC GGTGATCGTC 
AACGTAGCAG GCTTCTTTTG GGTACTTTCC CCGTTGAGTG GCGACGTGTT TCGCTCTTTT 
TTCGAACATA TGTGA 

 

Protein sequence

MRAKGKIVRW QDAKGFGFIH PLDGGADVFV HIRSFTNRQR RPVDGEIVTY TVEHDAQNRK 
RASDIVFAGE APPSERKQTA IGAGILLSLL FLIVLGVLSL MDRVPLVLFG FYVVLSLITI 
LAYGLDKSAA QHNRWRTQEN TLHLFSLFGG WPGALIAQNI FRHKTKKQPF QTVFWLTVIV 
NVAGFFWVLS PLSGDVFRSF FEHM