Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1807 |
Symbol | |
ID | 8534965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1942721 |
End bp | 1943743 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646384189 |
Product | fatty acid/phospholipid synthesis protein PlsX |
Protein accession | YP_003263677 |
Protein GI | 261856394 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.314057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTA AAATTGCGAT CGATGTGATG GGTGGCGATC ATGGCCCCGT CGTGACGCTG GCGGCAGCGG CGCAATTCCT TAGGGTGCAT CCCAGCGTGA CGCTGCTGCT GGTAGGCGAT GAAACCCTCG TGCGTTCGCA AATGAGCGCG CATGGTCTGG TTGAAGGCGA ACACATTCAG GTCGTGCATG CGCCTGAAGT TGTCGAGATG GCCGAATCGC CCGCGGTAGC ACTGCGTACT AAGAAGAAAT CATCCATGCG CGTTGCGGTC GACTGCGTGC GTGACGGCTC GGCGCAGGCA GCTGTGAGTG CGGGAAATAC CGGTGCGCTG ATGGCTACGG CCAAATTCGT CCTCAAGACC CTGCCCGGTA TTGAGCGTCC GGCCATCTGC ACGGCTCTAC CGAGTCGCAA GGGGCATACC CATGTGCTTG ATCTGGGTGC GAATGTTGAA TGCAACGCCG ACCATCTGTT CCAGTTTGCC GTGATGGGTT CGGTGCTGGT GGAAGCGTAT GACGATAATC CCGCGCCCAG AGTCGGTCTG CTCAACGTCG GTGCCGAGTC CATCAAGGGT AACGATACCG TCAAGGCAGC CTCGGCACTG TTGGAAAACG GGCCGATCAA CTATATCGGT TTTGTCGAAG GCGACGACAT CTACAAAGGG GATGTGGATG TCGTTGTATG CGATGGTTTT GTCGGTAATG TCGCGCTCAA GACCAGCGAG GGGCTGGCCA AGATGATCAC TCAGTTCCTG CGCGAAGAAT TCGGGCGTGG TTTACTGTCC AAGTTGGCGG CCGTCCTTGC GCTGCCTGTG CTCAAACGTC TGAAAAACAG ACTGGACCCA GGCCGATATA ATGGCGCCAG TTTTTTGGGG CTGCAGGGTA TCGTGATCAA AAGCCATGGC GGCGCCGACG TTTCGGCCTT CGCCAGTGCG CTCGGCGTGG CGCTGCGCGA GATCGAAAAA GACGTACCGC GCCGCATCGA CCAGCGGTTG GGCCAGCTAT TGAATGAAAA GGAAACAGCA TGA
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Protein sequence | MKAKIAIDVM GGDHGPVVTL AAAAQFLRVH PSVTLLLVGD ETLVRSQMSA HGLVEGEHIQ VVHAPEVVEM AESPAVALRT KKKSSMRVAV DCVRDGSAQA AVSAGNTGAL MATAKFVLKT LPGIERPAIC TALPSRKGHT HVLDLGANVE CNADHLFQFA VMGSVLVEAY DDNPAPRVGL LNVGAESIKG NDTVKAASAL LENGPINYIG FVEGDDIYKG DVDVVVCDGF VGNVALKTSE GLAKMITQFL REEFGRGLLS KLAAVLALPV LKRLKNRLDP GRYNGASFLG LQGIVIKSHG GADVSAFASA LGVALREIEK DVPRRIDQRL GQLLNEKETA
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