Gene Hneap_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1793 
Symbol 
ID8534951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1927674 
End bp1928618 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content55% 
IMG OID646384175 
Productrespiratory-chain NADH dehydrogenase subunit 1 
Protein accessionYP_003263663 
Protein GI261856380 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGCT ACCTCGTTTG GCAGCAAATC GCTCAAGTGG CCATGATTGT GCTGCTTTCC 
CCTCTGTTGC ACGGCTTTAT CACCACGGTG GAAGAAAAGG TCAAGCGCGG GCAGGGGCCG
AGCATCTTTC AACCGTATCG TGATCTCTTC AAATGGTTCC GCAAGGAACT GATTATCCCT
GAAACCGCTT CCTGGATTTT TTGGCTGGCT CCGGTCGTGG CGTTTACCGC CATGTTGACT
GTGCCCTTGC TGATTCCCGT ACTCACAAAT TATCCGCTGC CGCTCTCCGA CATGGGTGAT
ATTTTGGGTG GCGGTCTGAT TCTCACGCTC GGCGGCTTTG CTATTTTGCT GGCAGGGTTG
GATAGCGGCC ATCCCTACGG GGGGCTGGGT TCCAGCCGCG AATCAATGCT GACTATTCTG
GCCGAGCCGA CGCTGATCAT GGTGTTGGTG GGTATTTCCC TGCTCGCTCA ATCCATGCTG
CCGTTTGAGG TCAATCATCT GCTGGTACAC GATCCAGCGG TGTATTGGAG CCCATCGCAT
CTGTTTTTGG TGGCGGCATT TTTCATCTTG CTAACGGTCG AAACCGAGCG ACTGCCCATT
CATTCCTCCA TCCATTATGA AATCTACATG ATCGGCGAGG CGCGCATTCT CGAATATTCC
GGCCCGCTGC TGGCGCTCAT CAAATGGTCG TCTTGGATGA AGCAGGCCAT TTTGTACACC
ATTTTTCTGA ATGTTTTGAC TCTGCCTTGG GGGCTTTCCG AGTTGGGCAC CACGCTCGGC
ATCGCTGGGG CCGTCATCGC GCTGCTGGCC AAATGGGCGC TACTGGGGCT GTTGATGGTC
GGCGTGGAAA CAATGCAGGC ACGGCTGCGG TTTTATCGTT ATCAGGAGCC CTTGGCCTTG
TCTTTTTTGA TGGCGGTGTT GGCCGTTGTC GCCCACCAGA TGTGA
 
Protein sequence
MQSYLVWQQI AQVAMIVLLS PLLHGFITTV EEKVKRGQGP SIFQPYRDLF KWFRKELIIP 
ETASWIFWLA PVVAFTAMLT VPLLIPVLTN YPLPLSDMGD ILGGGLILTL GGFAILLAGL
DSGHPYGGLG SSRESMLTIL AEPTLIMVLV GISLLAQSML PFEVNHLLVH DPAVYWSPSH
LFLVAAFFIL LTVETERLPI HSSIHYEIYM IGEARILEYS GPLLALIKWS SWMKQAILYT
IFLNVLTLPW GLSELGTTLG IAGAVIALLA KWALLGLLMV GVETMQARLR FYRYQEPLAL
SFLMAVLAVV AHQM